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. 2012 Jan 17;7(1):e30295. doi: 10.1371/journal.pone.0030295

Table 2. Assessment of HER2 Asn deamidation and Asp isomerization using accelerated degradation conditions and quantitative UPLC-MS (Procedure B).

Storage Duration/Temperature RM/80°C 1 M/25°C 2 M/25°C 7 d/40°C 1 M/40°C 2 M/40°C
LC-Asn-30
LC-Asu-30 2.6 (±0.2) 9.0 (±0.3) 11.0 (±0.8) 12.5 (±0.3) 23.4 (±1.8) 24.8 (±1.7)
LC-Asp-30 0.4 (±0.1) 2.1 (±0.1) 3.1 (±0.1) 3.2 (±0.2) 4.7 (±0.1) 7.0 (±0.6)
LC-isoAsp-30 7.5 (±0.7) 10.9 (±0.4) 15.3 (±1.1) 11.1 (±1.1) 18.8 (±2.6) 26.5 (±0.2)
HC-Asn-55
HC-Asu-55 5.6 (±0.4) 5.5 (±0.7) 5.1 (±0.9) 5.5 (±0.4) 5.2 (±0.4) 5.4 (±0.6)
HC-deamid-55 3.6 (±0.4) 4.1 (±0.1) 3.8 (±0.6) 4.3 (±0.1) 5.4 (±0.5) 8.9 (±1.1)
HC-Asp-102
HC-Asu-102 2.1 (±0.2) 2.8 (±0.1) 2.8 (±0.1) 3.4 (±0.1) 3.1 (±0.4) 3.8 (±0.1)
HC-isoAsp-102 2.5 (±0.4) 9.0 (±0.5) 15.9 (±0.6) 14.6 (±0.2) 25.9 (±1.2) 46.1 (±1.0)
HC-Asp-283
HC-Asu-283 4.8 (±0.6) 5.2 (±0.7) 5.7 (±1.0) 5.9 (±1.3) 5.8 (±0.1) 5.6 (±0.5)
HC-isoAsp-283 0.9 (±0.1) 1.0 (±0.1) 1.3 (±0.3) 1.3 (±0.2) 2.1 (±0.1) 3.4 (±0.1)
HC-Asn-387,392,393
HC-Asu-387,392,393 0.7 (±0.1) 0.7 (±0.1) 1.0 (±0.1) 0.8 (±0.1) 0.9 (±0.1) 0.9 (±0.1)
HC-deamid-387,392,393 0.3 (±0.1) 0.8 (±0.1) 1.4 (±0.4) 1.0 (±0.1) 1.8 (±0.1) 3.8 (±0.1)
CEC
% Acidic 27.7 32.7 39.8 33.7 46.7 n.q.
% Main 63.5 51.3 38.5 45.0 26.0 n.q
% Basic 8.8 16.0 21.6 21.3 27.3 n.q
SEC
% Fragment <0.1 0.1 0.2 0.2 0.4 1.0
% Monomer 99.8 99.6 99.4 99.4 99.0 98.2
% Aggregate 0.2 0.3 0.4 0.4 0.6 0.8
SPR
% Target Binding 100 (±2) 93 (±2) 89 (±2) 90 (±2) 79 (±2) 59 (±3)

Relative quantification (in %) was conducted by specific ion current chromatogram analysis of proteolytic LysC peptides using the quantification software GRAMS/32™ (n = 2, mean ± S.D). HER2 charge variants were monitored by cation-exchange chromatography (CEC). Formation of fragments and aggregates was monitored by size-exclusion chromatography (SEC) and target binding activity was assessed by SPR-analysis. deamid, total Asp/iso-Asp; n.q., not quantifiable; RM, Reference material.