Table 1.
List of moderate-abundance proteins efficiently captured by the SuperMix column*.
| IPI# | Protein Name | Gene Name | Capture Efficiency (%) |
|---|---|---|---|
| IPI00164623.4 | Complement C3 | C3 | >99 |
| IPI00418163.3 | Complement 4B | C4B | 98 |
| IPI00032258.4 | Complement C4A | C4A | 98 |
| IPI00017601.1 | Ceruloplasmin | CP | >99 |
| IPI00022488.1 | Hemopexin | HPX | 99 |
| IPI00019591.1 | Complement factor B | CFB | 99 |
| IPI00218192.1 | Inter-alpha-trypsin inhibitor heavy chain H4 | ITIH4 | 99 |
| IPI00032291.1 | Complement C5 | C5 | >99 |
| IPI00006543.2 | Complement factor H-related 5 | CFHR5 | >99 |
| IPI00305461.2 | ITH2 | ITIH2 | >99 |
| IPI00515041.2 | Complement factor H. | CFH | >99 |
| IPI00292530.1 | ITH1 | ITIH1 | >99 |
| IPI00019580.1 | Plasminogen | PLG | >99 |
| IPI00215894.1 | Isoform LMW of kininogen-1 | KNG1 | 98 |
| IPI00032179.2 | Antithrombin III variant | SERPINC1 | >99 |
| IPI00032328.1 | Isoform HMW of kininogen-1 | KNG1 | 99 |
| IPI00009920.2 | Complement component C6 | C6 | >99 |
| IPI00298828.3 | Beta-2-glycoprotein 1 | APOH | >99 |
| IPI00022895.7 | Alpha-1B-glycoprotein | A1BG | >99 |
| IPI00022418.1 | Fibronectin | FN1 | >99 |
| IPI00294395.1 | Complement C8 beta chain | C8B | >99 |
| IPI00291866.5 | Plasma protease C1 inhibitor | SERPING1 | 98 |
| IPI00022420.3 | Plasma retinol-binding protein | RBP4 | >99 |
| IPI00165421.4 | SERPINC1 protein | SERPINC1 | >99 |
| IPI00021885.1 | Fibrinogen alpha chain | FGA | >99 |
| IPI00022371.1 | Histidine-rich glycoprotein | HRG | 99 |
| IPI00298497.3 | Fibrinogen beta chain | FGB | >99 |
| IPI00298971.1 | Vitronectin | VTN | 99 |
| IPI00021891.5 | Fibrinogen gamma chain | FGG | >99 |
| IPI00736985.1 | Similar to ceruloplasmin | LOC441368 | >99 |
| IPI00021727.1 | C4B-binding protein alpha chain | C4BPA | >99 |
| IPI00296608.6 | Complement component C7 | C7 | >99 |
| IPI00011252.1 | Complement C8 alpha chain | C8A | >99 |
| IPI00022391.1 | Serum amyloid P-component | APCS | 98 |
| IPI00011261.1 | Complement C8 gamma chain | C8G | >99 |
| IPI00294004.1 | Vitamin K-dependent protein S | PROS1 | >99 |
| IPI00011264.1 | Complement factor H-related protein 1 | CFHR1 | >99 |
| IPI00006154.1 | Complement factor H-related protein 2 | CFHR2 | >99 |
| IPI00021364.1 | Properdin | CFP | 93 |
| IPI00022392.1 | Complement C1Q subunit A | C1QA | >99 |
| IPI00022394.2 | Complement C1Q subunit C | C1QC | >99 |
| IPI00477992.1 | C1Q subcomponent, B chain | C1QB | >99 |
| IPI00027507.1 | Complement factor H-related protein 3 | CFHR3 | >99 |
| IPI00025862.1 | C4B-binding protein beta chain | C4BPB | >99 |
| IPI00029168.1 | Apolipoprotein(a) | LPA | >99 |
*
The capture efficiency was estimated for each protein based on MS/MS spectral count data by dividing the spectral count for each protein from the bound fraction by the sum of spectral counts from the bound fraction (B) and flow-through fraction (FT), i.e. B/(B+FT). If proteins were not observed in flow-through fraction, these proteins were represented as >99%.