Table 2.
All probes of the BRCA1-like MLPA kit
| Probe name | Genomic location | Stuffer length | Probe type |
|---|---|---|---|
| SEMA3B - 3 | 03-050282676 | 140 | Test_loss |
| RASSF1 - 1 | 03-050353347 | 328 | Test_loss |
| DEPDC1B - 2 | 05-060018734 | 241 | Test_loss |
| MCCC2 - 16 | 05-070984253 | 409 | Test_loss |
| GPR98 - 90 | 05-090495354 | 184 | Test_loss |
| APC - 1 | 05-112071337 | 226 | Test_loss |
| LMNB1 - 7 | 05-126184598 | 214 | Test_loss |
| PTEN - 1 | 10-089614110 | 233 | Test_loss |
| PTEN - 9 | 10-089714978 | 463 | Test_loss |
| CEP290 - 26 | 12-087019051 | 400 | Test_loss |
| BTG1 AREA - 29 | 12-090905485 | 155 | Test_loss |
| PAH - 3 | 12-101812669 | 202 | Test_loss |
| BMP4 - 4 | 14-053488631 | 454 | Test_loss |
| GCH1 - 6b | 14-054380537 | 283 | Test_loss |
| RDH12 - 7 | 14-067263397 | 319 | Test_loss |
| THBS1 - 1 | 15-037660496 | 346 | Test_loss |
| CAPN3 - 16 | 15-040479002 | 148 | Test_loss |
| FBN1 - 4 | 15-046679657 | 172 | Test_loss |
| CASR - 7 | 03-123485226 | 483 | Test_gain |
| ATR - 47 | 03-143651063 | 373 | Test_gain |
| HLTF - 1 | 03-150286916 | 193 | Test_gain |
| PDCD10 - 5 | 03-168905298 | 382 | Test_gain |
| PIK3CA - 2 | 03-180399607 | 427 | Test_gain |
| TPMT - 5 | 06-018247829 | 265 | Test_gain |
| HFE - 2 | 06-026198995 | 301 | Test_gain |
| FANCE - 7 | 06-035535433 | 274 | Test_gain |
| GATA3 - 1 | 10-008136773 | 136 | Test_gain |
| CUGBP2 - 6 | 10-011017023 | 364 | Test_gain |
| FGF23 - 1 | 12-004358933 | 436 | Test_gain |
| ETV6 - 5 | 12-011913651 | 474 | Test_gain |
| ABCC4 - 23 | 13-094525703 | 247 | Test_gain |
| PCCA - 6 | 13-099607548 | 418 | Test_gain |
| PCCA - 11 | 13-099718959 | 291 | Test_gain |
| FGF14 - 2 | 13-101366785 | 492 | Test_gain |
| BRCA1 - 20 | 17-038462662 | 390 | BRCA probe |
| BRCA1 - 2 | 17-038529544 | 167 | BRCA probe |
| BRCA2 - 5 | 13-031798006 | 337 | BRCA probe |
| BRCA2 - 11 | 13-031812003 | 130 | BRCA probe |
| REFERENCE | 02-071430713 | 355 | Reference |
| REFERENCE | 02-267097 | 310 | Reference |
| REFERENCE | 07-075448405 | 124 | Reference |
| REFERENCE | 07-116126400 | 160 | Reference |
| REFERENCE | 10-042932039 | 178 | Reference |
| REFERENCE | 10-075547782 | 220 | Reference |
| REFERENCE | 14-019994693 | 208 | Reference |
MLPA, Multiplex Ligation-dependent Probe Amplification