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. Author manuscript; available in PMC: 2012 Jan 22.
Published in final edited form as: J Comput Chem. 2008 Jul 30;29(10):1527–1542. doi: 10.1002/jcc.20909

Figure 3. A Sample Conformation Tree.

Figure 3

In a conformation tree, the rotamers of flexible residue i are represented by the branches at depth i. Internal nodes of a conformation tree represent partially-assigned conformations and each leaf node represents a fully-assigned conformation. Nodes marked with ×s have been pruned from further consideration.