Table 1. PCR primers used in this analysis.
Gene | Forward Sequence 5′-3′ | Reverse Sequence 5′-3′ | Product Size (bp) | Annealing temp (°C) |
---|---|---|---|---|
Shh |
CCCTTTAGCCTACAAGCAGT |
CCACTGGTTCATCACAGAG |
232 |
57 |
Dhh |
ACATCACCACGTCTGACC |
GAACACCGGTGCAAAGTCAC |
309 |
58 |
Ihh |
ACGTGCATTGCTCTGTCAAGT |
CTGGAAAGCTCTCAGCCGGTT |
221 |
58 |
Ptch1 |
CTGCTGCTATCCATCAGCGT |
AAGAAGGATAAGAGGACAGG |
452 |
58 |
Ptch2 |
TGCCTCTCTGGAGGGCTTCC |
CAGTTCCTCCTGCCAGTGCA |
207 |
58 |
Smo |
GTGATGATGAGCCCAAGAGA |
AGGGGCAGAGTGGTGAAGC |
422 |
58 |
Gli1 |
CAGGGAAGAGAGCAGACTGA |
AGCTGATGCAGCTGATCCAG |
251 |
60 |
Gli2 |
ACGACTTTCTCCACACCCTGC |
TGATGTAAGCTACCAGCGAG |
478 |
60 |
Gli3 |
ATCCGCTCATTGCACAGCAG |
TGAAGCTCAATGCAGGGCTG |
436 |
58 |
Hprt |
CCTGTCGGATTACATTAAAGCACTG |
GTCAAGGGCATATCCAACAACAAC |
301 |
57 |
Gsk3β |
CAG CCT TCA GCT TTT GGT AGC |
TCCACCAACTGATCCACACCAC |
750 |
58 |
Pax6 |
AGTTCTTCGCAACCTGGCTA |
TGAAGCTGCTGCTGATAGGA |
519 |
62.5 |
Su(Fu) | GCT CCA GGT TAC CGC TAT CG | GCT GCC CAA ACT GTC CTTGC | 772 | 58 |