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. 2012 Jan 18;18:139–150.

Table 1. PCR primers used in this analysis.

Gene Forward Sequence 5′-3′ Reverse Sequence 5′-3′ Product Size (bp) Annealing temp (°C)
Shh
CCCTTTAGCCTACAAGCAGT
CCACTGGTTCATCACAGAG
232
57
Dhh
ACATCACCACGTCTGACC
GAACACCGGTGCAAAGTCAC
309
58
Ihh
ACGTGCATTGCTCTGTCAAGT
CTGGAAAGCTCTCAGCCGGTT
221
58
Ptch1
CTGCTGCTATCCATCAGCGT
AAGAAGGATAAGAGGACAGG
452
58
Ptch2
TGCCTCTCTGGAGGGCTTCC
CAGTTCCTCCTGCCAGTGCA
207
58
Smo
GTGATGATGAGCCCAAGAGA
AGGGGCAGAGTGGTGAAGC
422
58
Gli1
CAGGGAAGAGAGCAGACTGA
AGCTGATGCAGCTGATCCAG
251
60
Gli2
ACGACTTTCTCCACACCCTGC
TGATGTAAGCTACCAGCGAG
478
60
Gli3
ATCCGCTCATTGCACAGCAG
TGAAGCTCAATGCAGGGCTG
436
58
Hprt
CCTGTCGGATTACATTAAAGCACTG
GTCAAGGGCATATCCAACAACAAC
301
57
Gsk3β
CAG CCT TCA GCT TTT GGT AGC
TCCACCAACTGATCCACACCAC
750
58
Pax6
AGTTCTTCGCAACCTGGCTA
TGAAGCTGCTGCTGATAGGA
519
62.5
Su(Fu) GCT CCA GGT TAC CGC TAT CG GCT GCC CAA ACT GTC CTTGC 772 58