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. 2012 Jan 24;7(1):e30901. doi: 10.1371/journal.pone.0030901

Table 8. Plasmids and strains.

Strain or plasmid Derivation and/or relevant characteristic Source or reference
Plasmids
pAM2255 Expression vector carrying a trc (IPTG inducible) promoter, Apr H. Iwasaki, [70]
pAM4413 pRL1383a vector carrying the yemGFP open reading frame downstream of trc constitutive promoter, Spr Smr This study
pAM4418 Conjugal destination vector pRL1383a carrying an IPTG inducible trc promoter upstream of a Gateway recombination cassette, Spr Smr Cmr This study
pAM4418-yemGFP Expression plasmid resulting from a Gateway LR recombination reaction of pENTR-SD-yemGFP and pAM4418, Spr Smr This study
pDEST_M3 Gateway destination vector optimized for Synechococcus elongatus PCC 7942 and carries lacI q and trc promoter upstream of a recombination cassette. Apr Kmr Cmr This study
pENTR-SD/D-TOPO Gateway entry vector with Shine-Dalgarno sequence; Kmr Invitrogen
pENTR-SD-yemGFP pENTR-SD/D-TOPO carrying the yemGFP open reading frame, Kmr This study
pEXP_1ax-yemGFP Expression vector carrying yemGFP downstream of an IPTG inducible promoter, Spr Smr Cmr This study
pJS151 Expression plasmid containing yemGFP, a GFP allele with F64L, S65T, and A206K mutations and that has been codon-optimized for expression in yeast. The first two mutations correspond to mut1GFP [71], and the third mutation interferes with GFP dimerization [72] J. Hasty
pRK2013 Conjugal plasmid, derivative of RK2, Kmr J. Meeks, [34], [53]
pRL443 Conjugal plasmid, Kms derivative of RP4, Apr Tcr [25]
pRL623 Helper plasmid carrying MobColK and methylase genes M.AvaI, M.Eco47II, M.EcoT22I, Cmr [25]
pRL692 Transposon mutagenesis plasmid carrying the mobile element Tn5-692 that contains a pMB1 oriV, Spr Smr Emr (GenBank Accession No. AF424805) [36]
pRL1383a Mobilizable, broad host range plasmid derived from RSF1010, Spr Smr (GenBank Accession No. AF403426) [54]
E. coli strains
DH5α Cloning host Gibco BRL
DH10B Cloning host Gibco BRL
One Shot ccdB Survival™ (T1R) Cloning host Invitrogen
One Shot TOP10 Cloning host Invitrogen
AM1358 DH10B harboring pRL623, Cmr [52]
AM1359 DH10B harboring pRL623 and pRL443, Cmr Apr Tcr [73]
AM4338 AM1359 harboring pRL1383a, Cmr Apr Tcr Spr Smr This study
AM4353 AM1359 harboring pRL692, Cmr Apr Tcr Spr Smr Emr This study
AM4389 DH10B harboring pENTR-SD-yemGFP, Kmr This study
AM4413 DH10B harboring pAM4413, Spr Smr This study
AM4414 AM1359 harboring pAM4413, Cmr Apr Tcr Spr Smr This study
AM4415 DH10B harboring pRL443, Apr Tcr This study
AM4416 DH10B harboring pRK2013, Kmr This study
AM4417 AM1358 harboring pAM4413, Cmr Spr Smr This study
AM4503 One Shot ccdB Survival™ harboring pDEST_M3, Kmr Apr Cmr This study
AM4517 DH5α harboring pAM4418-yemGFP, Spr Smr This study
Cyanobacterial strains
BL0902 Wild type This study
BL0909 Wild type This study
CS-328 Wild type D. Bryant
PCC 7120 Wild type Laboratory collection
PCC 7942 (AMC006) Wild type Laboratory collection
HHS Vulnerability Disclosure