Table 1. Alternative spliced loci producing multiple protein isoforms.
| TAIR 10 Locus | Symbol | Event type | Effect | Corresponding TAIR 10 identifiers |
| AT1G24260 | AGL9, SEP3 | alternative donor | I-/K-box domain border:1 AA difference | AT1G24260.2 AT1G24260.1 |
| AT1G77080 | FLM, AGL27, MAF1 | mutually exclusive exons | I-domain:Exon-5′: 19 AAExon-3′: 15 AA | AT1G77080.2 AT1G77080.4 |
| cryptic exon | C-terminus:Addition of 10AA followed by a 33 AA truncation | AT1G77080.4/AT1G77080.5 | ||
| intron retention | K-box26 AA difference | AT1G77080.2/EST-based | ||
| AT2G22540 | AGL22, SVP | alternative donor | I-domain4 AA difference | AT2G22540.1/AT2G22540.2 |
| AT2G42830 | AGL5, SHP2 | alternative donor | K-box:2 AA difference | AT2G42830.2/AT2G42830.1 |
| AT3G58780 | AGL1, SHP1 | alternative acceptor | I-domain:6 AA difference | AT3G58780.1/AT3G58780.2 |
| AT4G09960 | AGL11, STK | Exon Skipping | K-box:14 AA difference | AT4G09960.1/AT4G09960.2 |
| AT5G23260 | AGL32, ABS, TT16 | alternative acceptor | K-box:5 AA difference | AT5G23260.2/AT5G23260.1 |
| AT5G51860 | AGL72 | alternative acceptor | C-terminus:9 AA difference | AT5G51860.1/AT5G51860.2 |
| AT5G65060 | AGL70, FCL3, MAF3 | alternative acceptor | K-box:10 AA difference | AT5G65060.1/AT5G65060.2 |
| AT5G65050 | MAF2, AGL31 | alternative acceptor | K-box:10 AA difference | AT5G65050.2/EST-based |
| AT5G10140 | FLF, AGL25, FLC | alternative acceptor | C-terminus:4AA insertion followed by 33 AA truncation | AT5G10140.1/AT5G10140.2 |
| exon skipping | K-box/C-terminus:14 AA difference | AT5G10140.1/AT5G10140.4 | ||
| alternative acceptor | C-terminus:9 AA Deletion followed by17 AA frame shift followed by6 AA deletion | AT5G10140.1/EST-based | ||
| cryptic exon | C terminus:Insertion: 23 AA followed by 33 AA truncation | AT5G10140.1/AT5G10140.3 | ||
| AT2G03710 | AGL3, SEP4 | alternative acceptor | C-domain:1 AA difference | AT2G03710.1/AT2G03710.2 |
The type of event and effect on the protein domain architecture is provided for each AS event that results in a translatable mRNA. For each event the TAIR 10 identifiers of the corresponding variants are given when possible. The EST-based annotation corresponds to variants that were not present in the TAIR 10 annotation.