Table 3. Additional translatome evidence for the predicted functional AS events.
TAIR locus | Symbol | Splicing event | Translatome reads |
AT1G77080 | FLM/MAF1 | mutually exclusive exons | 88/55MAF1.4/MAF1.2 |
intron retention | 29/38MAF1.4/Retainedintron | ||
AT2G22540 | AGL22/SVP | alternative donor | 48/1SVP1/SVP3 |
AT2G42830 | AGL5/SHP-2 | alternative donor | X |
AT4G09960 | AGL11/STK | exon skipping | X |
AT5G23260 | AGL32/ABS | alternative acceptor | X |
AT5G65050 | MAF2 | alternative acceptor | X |
AT5G65060 | MAF3 | alternative acceptor | X |
AT1G24260 | AGL9/SEP3 | alternative donor | 361/221SEP-3.2/SEP-3.1 |
The total numbers of reads supporting each of the alternatives are given for the translatome data as determined using MISO. “X” is used to denote that an AS event could not be confirmed in this analysis.