Table 4. Impacts of the different pathways evaluated by Gene Set Enrichment Analysis (GSEA) derived from Protein Analysis THrough Evolutionary Relationship (PANTHER).
GS | Size | Pathway | NES | NOM p-value | FDR |
P00005 | 31 | Angiogenesis | −1.17 | 0.28 | 0 |
P00027 | 17 | Heterotrimeric G-protein signaling pathway-Gq alpha and Go alpha mediated pathway | −1.16 | 0.28 | 0 |
P00004 | 42 | Alzheimer disease-presenilin pathway | −1.12 | 0.33 | 0.35 |
P00047 | 37 | PDGF signaling pathway | −1.12 | 0.32 | 0.26 |
P00029 | 37 | Huntington disease | −1.08 | 0.41 | 0.35 |
P00059 | 21 | p53 pathway | −1.06 | 0.43 | 0.31 |
P00006 | 28 | Apoptosis signaling pathway | −1.06 | 0.50 | 0.28 |
P00048 | 18 | PI3 kinase pathway | −1.04 | 0.46 | 0.27 |
P00031 | 45 | Inflammation mediated by chemokine and cytokine signaling pathway | −1.03 | 0.49 | 0.26 |
P00019 | 19 | Endothelin signaling pathway | −1.00 | 0.50 | 0.33 |
P00036 | 35 | Interleukin signaling pathway | −0.98 | 0.51 | 0.37 |
P00057 | 62 | Wnt signaling pathway | −0.98 | 0.54 | 0.34 |
P00052 | 44 | TGF-beta signaling pathway | −0.89 | 0.66 | 0.56 |
P00034 | 43 | Integrin signalling pathway | −0.89 | 0.68 | 0.53 |
P00012 | 40 | Cadherin signaling pathway | −0.87 | 0.66 | 0.55 |
P00046 | 22 | Oxidative stress response | −0.86 | 0.67 | 0.55 |
P00026 | 33 | Heterotrimeric G-protein signaling pathway-Gi alpha and Gs alpha mediated pathway | −0.85 | 0.68 | 0.57 |
P04398 | 28 | p53 pathway feedback loops 2 | −0.83 | 0.74 | 0.58 |
P00016 | 23 | Cytoskeletal regulation by Rho GTPase | −0.81 | 0.71 | 0.59 |
P00060 | 44 | Ubiquitin proteasome pathway | −0.73 | 0.81 | 0.81 |
P00007 | 16 | Axon guidance mediated by semaphorins | −0.67 | 0.87 | 0.90 |
GS, gene set; Size, numbers of miRs included; NES, nominal enrichment score; NOM p-value, nominal p-value; FDR, false discovery rate.