Table 1.
Survey of the eukaryote species in which DIRS1-like retrotransposons were previously detected
Higher taxon | Species | References |
---|---|---|
Actinistia | Latimeria menadoensis | Repbase1 |
Danio rerio | [1,8] | |
Oncorhynchus mykiss | GenBank (2006) | |
Actinopterygii | Salmo salar | GenBank (2006) |
Takifugu rubripes | [46] | |
Tetraodon nigroviridis | [1] | |
Amoebozoa | Dictyostelium discoideum | [47] |
Xenopus laevis | [1] | |
Amphibia | Xenopus tropicalis | [1] |
Cnidaria | Nematostella vectensis | [48] |
Crustacea | Daphnia pulex | [25,24] |
16 decapod species | [16] | |
Dinoflagellata | Perkinsus marinus | GenBank (2010) |
Arbacia punctulata | [21] | |
Echinodermata | Lytechinus variegates | [8] |
Strongylocentrotus purpuratus | [1] | |
Hemichordata | Saccoglossus kowalevskii | GenBank (2010) |
Apis mellifera | [21] | |
Camponotus floridanus | [27] | |
Glyptapanteles indiensis | GenBank (2008) | |
Hexapoda | Harpegnathos saltator | [27] |
Nasonia vitripennis | GenBank (2007) | |
Solenopsis invicta | [28] | |
Tribolium castaneum | [21] | |
Mucoromycotina | Phycomyces blakesleeanus | [49] |
Rhizopus oryzae | [8] | |
Sauropsida | Gopherus agassizii | [5] |
Urochordata | Oikopleura dioica | [50] |
All the detected DIRS1-like elements, even in partial sequences, are reported here.
Notes: 1Repbase: version 14.06 (http://www.girinst.org/repbase/update/index.html).