Table 1.
Databases and samples numbers used to identify candidate Arlm1 genes
| Description | Database | # Samples | # Genes Examined | Results |
|---|---|---|---|---|
| Genes in Arlm1 locus | NCBI Map Viewer | NA | NA | 503 genes |
| Mouse genes polymorphic B6 vs 129 | Mouse Phenome Database | NA | 267 genes | 100 genes |
| Differential exp in male B6 vs 129 brains | PhenoGen | 4–6 per strain | 73 probe sets | 41 genes |
| Human amp/del of Chr 7 or 14 in astrocytoma | NCBI Cancer Chromosomes | 642 grade II-IV, NOS | NA | 39% Chr 7 |
| 15% Chr 14 | ||||
| Human amp/del of Chr 7 or 14 in astrocytoma | Cancer Genome Workbench (REMBRANDT) | 56 astrocytoma (28 males, 18 females, 10 NOS) | NA | 21% Chr 7 |
| 17% Chr 14 | ||||
| Human amp/del of Chr 7 or 14 in GBM | Cancer Genome Workbench (REMBRANDT) | 130 GBM (59 male, 17 female, 53 NOS) | NA | 49% Chr 7 |
| 22% Chr 14 | ||||
| Human amp/del of Chr 7 or 14 in GBM | Cancer Genome Workbench (TCGA) | 793 GBM | NA | 77% Chr 7 |
| 33% Chr 14 | ||||
| Correlation of expression with survival time | REMBRANDT | 248 glioma (153 males, 95 females) | 58 homologs | 30 genes |
| Correlation of expression with survival time | Cancer Molecular Analysis Portal | 210 GBM (131 males, 79 females) | 53 homologs | 11 genes |
Abbreviations: NOS, not otherwise specified.