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. 2012 Jan 26;8(1):e1002455. doi: 10.1371/journal.pgen.1002455

Table 3. Results of combined study for Japanese patients with SLE.

rsID	Chr	Position (bp)	Cytoband	Gene	Allele	Stage	No. subjects		Allele 1 freq.		OR (95%CI)	P	eQTL^a
					1/2		Case	Control	Case	Control
rs340630	4	88,177,419	4q21	AFF1	A/G	GWAS	891	3,383	0.56	0.51	1.22 (1.10–1.36)	1.5×10⁻⁴	+
						Replication study 1	550	646	0.57	0.49	1.40 (1.19–1.64)	4.6×10⁻⁵
						Replication study 2	820	27,911	0.56	0.53	1.14 (1.03–1.26)	0.0094
						Combined study	2,261	31,940	0.56	0.52	1.21 (1.14–1.30)	8.3×10⁻⁹

^a

Defined using gene expression data measured in lymphoblastoid B cell lines [28].