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. Author manuscript; available in PMC: 2012 Aug 1.
Published in final edited form as: Nat Genet. 2012 Jan 8;44(2):212–216. doi: 10.1038/ng.1042

Figure 5. Enrichment of GWAS results with signals of selection.

Figure 5

SNPs associated with both (a) silique length and (b) in planta concentration of Boron are strongly enriched in the extreme tail of scans testing for signatures of selection (e.g., −log10 rank statistic = 1 corresponds to the 10% tail). The sizes of the circles denote significance based on 1000 permutations (smallest circle shown corresponds to p=0.032 and the largest circle corresponds to p=0.001). GWAS SNPs were considered if their minor allele frequency was larger than 5% and when P < 1×10−4.