Table I.
Comparison of GWAS results obtained using marker or causative SNPs.
GWAS P-values | GWAS PoPVg | |||||
---|---|---|---|---|---|---|
# strains | D′ | r | Causative | Marker | Causative | Marker |
Genetic effect size = 2 | ||||||
12 | 1 | 0.85 | 0.03 | 0.08 | 0.54 | 0.40 |
16 | 1 | 0.88 | 0.01 | 0.03 | 0.53 | 0.42 |
Genetic effect size = 3 | ||||||
12 | 1 | 0.85 | 0.002 | 0.02 | 0.73 | 0.53 |
16 | 1 | 0.88 | 0.0003 | 0.004 | 0.72 | 0.57 |