Table 3.
Human proteins found only in at least 3 healthy samples or only in at least 3 diseased samples.
| Accession | Protein | No. | Pep. Count | Spec. Count |
|---|---|---|---|---|
| Periodontally Healthy | ||||
| P01019 | Angiotensinogen | 9 | 1.7 | 4.5 |
| P19971 | Thymidine phosphorylase | 6 | 1.9 | 4.0 |
| P10909 | Clusterin | 5 | 2.0 | 3.0 |
| P14923 | Junction plakoglobin | 4 | 1.4 | 1.9 |
| P22392 | Nucleoside diphosphate kinase B | 3 | 1.7 | 2.7 |
| Q04695 | Keratin, type I cytoskeletal 17 | 5 | 1.2 | 2.5 |
| P52566 | Rho GDP-dissociation inhibitor 2 | 4 | 1.0 | 2.1 |
| P52565 | Rho GDP-dissociation inhibitor 1 | 3 | 1.0 | 2.3 |
| P35749 | Myosin-11 | 3 | 1.0 | 2.7 |
| P30101 | Protein disulfide-isomerase A3 | 3 | 1.0 | 1.0 |
| Q96FQ6 | Protein S100-A16 | 3 | 1.0 | 1.5 |
| Chronic Periodontitis | ||||
| P00915 | Carbonic anhydrase 1 | 7 | 1.9 | 2.3 |
| P59665 | Neutrophil defensin 1 | 6 | 1.1 | 2.0 |
| P26641 | Elongation factor 1-gamma | 5 | 1.0 | 1.4 |
| P22531 | Small proline-rich protein 2E | 3 | 1.7 | 3.0 |
| Q04760 | Lactoylglutathione lyase | 4 | 1.0 | 1.2 |
| Q8TC07 | TBC1 domain family member 15 | 4 | 1.0 | 2.0 |
| Q71U36 | Tubulin alpha-1A chain | 4 | 1.0 | 2.8 |
| P63241 | Eukaryotic translation initiation factor 5A-1 | 4 | 1.0 | 1.1 |
| P02814 | Submaxillary gland androgen-regulated protein 3B | 4 | 1.0 | 2.8 |
| Q96EN8 | Molybdenum cofactor sulfurase | 4 | 1.0 | 1.7 |
| P09972 | Fructose-bisphosphate aldolase C | 3 | 1.0 | 1.1 |
| P07357 | Complement component C8 alpha chain | 3 | 1.0 | 3.0 |
| Q14CN4 | Keratin, type II cytoskeletal 72 | 3 | 1.1 | 2.6 |
| O75367 | Core histone macro-H2A.1 | 3 | 1.0 | 1.9 |
| Q9UL46 | Proteasome activator complex subunit 2 | 3 | 1.0 | 1.3 |
| Q9NUT2 | ATP-binding cassette sub-family B member 8, mitochondrial | 4 | 1.0 | 1.1 |
| P55854 | Small ubiquitin-related modifier 3 | 3 | 1.0 | 1.7 |
| P14678 | Small nuclear ribonucleoprotein-associated proteins B and B' | 3 | 1.0 | 2.9 |
| A0RQ16 | Serine hydroxymethyltransferase | 3 | 1.0 | 2.8 |
| P01814 | Ig heavy chain V-II region OU | 3 | 1.0 | 1.0 |
| Q96DA0 | Uncharacterized protein UNQ773/PRO1567 | 3 | 1.0 | 2.8 |
| Q9NPG4 | Protocadherin-12 | 3 | 1.0 | 1.6 |
| O83110 | Chaperone protein clpB | 3 | 1.0 | 1.0 |
| Q96TA1 | Niban-like protein 1 | 3 | 1.0 | 1.4 |
| Q9UHV7 | Mediator of RNA polymerase II transcription subunit 13 | 3 | 1.0 | 1.3 |
| Q86UK0 | ATP-binding cassette sub-family A member 12 | 3 | 1.0 | 2.8 |
| Q8N398 | von Willebrand factor A domain-containing protein 5B2 | 3 | 1.0 | 1.6 |
| Q8NDL9 | Cytosolic carboxypeptidase-like protein 5 | 3 | 1.0 | 1.4 |
| A0RNI3 | Protein translocase subunit secA | 3 | 1.0 | 2.5 |
For each protein, the UniProt accession number is given along with the total number (No.) of samples that contained the protein, the average peptide count (Pep. Count), and the average MS/MS count (Spec. Count).