Table 4.
Bacterial protein list for the twelve healthy samples and twelve diseased samples using the comprehensive bacterial database.
| Accession | UniProt ID | Protein Name | No. | Pep. No. | Spec. No. |
|---|---|---|---|---|---|
| Periodontally Healthy | |||||
| Q8CXP5 | HSLO_OCEIH | 33 kDa chaperonin | 9 | 6.8 | 9.5 |
| Q55835 | FUTA2_SYNY3 | Iron uptake protein A2 | 7 | 5.0 | 6.0 |
| Q7U4M0 | CAPP_SYNPX | Phosphoenolpyruvate carboxylase | 7 | 4.8 | 14.0 |
| Q6D065 | MUTL_ERWCT | DNA mismatch repair protein mutL | 6 | 5.8 | 5.8 |
| A7Z4X5 | MUTS_BACA2 | DNA mismatch repair protein mutS | 6 | 6.0 | 10.2 |
| Q6F054 | Y6523_BACAN | Uncharacterized protein pXO2-25/BXB0023/GBAA_pXO2_0023 | 6 | 4.7 | 7.5 |
| Q9CLV1 | Y1101_PASMU | Uncharacterized protein PM1101 | 6 | 5.8 | 9.8 |
| A7MWQ3 | UPPP_VIBHB | Undecaprenyl-diphosphatase | 4 | 4.0 | 7.5 |
| P75749 | YBGP_ECOLI | Uncharacterized fimbrial chaperone ybgP | 4 | 3.8 | 5.5 |
| P23325 | ARPA_ECOLI | Ankyrin repeat protein A | 4 | 4.5 | 9.5 |
| P75396 | Y386_MYCPN | Uncharacterized protein MG268 homolog | 4 | 4.0 | 6.0 |
| Q057X7 | DNAJ_BUCCC | Chaperone protein dnaJ | 4 | 3.0 | 7.0 |
| Q0ANP7 | EFG_MARMM | Elongation factor G | 3 | 2.3 | 5.3 |
| Q046A0 | RPOA_LACGA | DNA-directed RNA polymerase subunit alpha | 3 | 2.3 | 6.5 |
| A7I3U0 | RL7_CAMHC | 50S ribosomal protein L7/L12 | 2 | 1.5 | 3.0 |
| Q4QP46 | NAGB_HAEI8 | Glucosamine-6-phosphate deaminase | 1 | 1.0 | 3.0 |
| A5GDA7 | ARLY_GEOUR | Argininosuccinate lyase | 1 | 1.0 | 2.0 |
| Chronic Periodontitis | |||||
| Q2RRP5 | RBL2_RHORT | Ribulose bisphosphate carboxylase | 12 | 18.4 | 46.1 |
| P42316 | SCOB_BACSU | Probable succinyl-CoA:3-ketoacid-coenzyme A transferase sub | 10 | 7.2 | 18.8 |
| Q9AIU3 | RPOB_ANAPH | DNA-directed RNA polymerase subunit beta | 8 | 8.8 | 19.3 |
| A0RHL7 | RS16_BACAH | 30S ribosomal protein S16 | 7 | 8.0 | 10.3 |
| Q59906 | G3P_STREQ | Glyceraldehyde-3-phosphate dehydrogenase | 7 | 5.1 | 9.6 |
| Q1RFM3 | BETA_ECOUT | Choline dehydrogenase | 7 | 5.8 | 15.1 |
| O32755 | G3P_LACDE | Glyceraldehyde-3-phosphate dehydrogenase | 6 | 6.0 | 18.1 |
| Q223B1 | UBID_RHOFD | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | 6 | 4.0 | 4.0 |
| O07401 | HEMH_MYCAV | Ferrochelatase | 5 | 4.0 | 7.0 |
| P29433 | RNPA_BUCAP | Ribonuclease P protein component | 3 | 2.0 | 3.7 |
| Q21V38 | KDSA_RHOFD | 2-dehydro-3-deoxyphosphooctonate aldolase | 3 | 2.7 | 3.0 |
| O83217 | EFTU_TREPA | Elongation factor Tu | 3 | 2.7 | 5.3 |
| A5CQS6 | PYRH_CLAM3 | Uridylate kinase | 2 | 1.5 | 3.0 |
For each protein, the total number (No.) of samples containing that protein is listed along with the average number of assigned peptides (Pep. No.) and the average number of assigned spectra (Spec. No.).