Table 3.
Genes from MD-resistant and -susceptible gene lists enriched in more than 5 biofunctions
| T.Point | R./S. | Genes | +/- | No. Bio. |
P.Name | S. Name | Description |
|---|---|---|---|---|---|---|---|
| 10dpi | R. | GNAQ | - | 39 | *002455 | AJ851735 | Q5F3B5 : (Q5F3B5) Hypothetical protein |
| R. | PRKG1 | - | 33 | *015981 | BU421057 | Q9Z0Z0 : (Q9Z0Z0) cGMP-dependent protein kinase 1, beta isozyme (CGK 1 beta) (cGKI-beta) | |
| R. | CD8A | + | 27 | *007686 | CR390735 | XP_420863 : gi:50747402:ref:XP_420863.1: PREDICTED: similar to CD8 alpha chain [Gallus gallus] | |
| R. | RGS4 | - | 27 | A_87_P021537 | BX950639 | Gallus gallus finished cDNA, clone ChEST606e8. [BX950639] | |
| R. | RARB | - | 25 | A_87_P008918 | X56674 | Chicken mRNA for retinoic acid binding protein beta isoform. [X56674] | |
| R. | HAS3 | + | 12 | *013355 | BU278152 | Q8CEB9 : (Q8CEB9) Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732404L04 product:similar to DG42III | |
| R. | SPINK5 | - | 12 | *005267 | CR353088 | P10184 : gi:1708509:sp:P10184:IOV7_CHICK Ovoinhibitor precursor >gnl:BL_ORD_ID:146450 gi:212485:gb:AAA48994.1: ovoinhibitor | |
| R. | SULF2 | - | 10 | A_87_P022688 | BX934216 | Gallus gallus finished cDNA, clone ChEST442e20. [BX934216] | |
| R. | COL14A1 | - | 9 | A_87_P008851 | X70793 | G.domesticus mRNA for collagen XIV (longer splice variant). [X70793] | |
| R. | SCN4B | - | 9 | A_87_P021873 | BX935954 | Gallus gallus finished cDNA, clone ChEST430l23. [BX935954] | |
| R. | WISP1 | - | 9 | A_87_P009711 | DQ003338 | Gallus gallus WNT1 inducible signaling pathway protein 1 (WISP-1) mRNA, complete cds. [DQ003338] | |
| R. | AHNAK | - | 5 | *004305 | BX935083 | NP_033773 : gi:61743961:ref:NP_033773.1: AHNAK nucleoprotein isoform 1 [Mus musculus] | |
| R. | P4HA2 | - | 5 | A_87_P007103 | TC198023 | Q8BU53 (Q8BU53) Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230038K10 product:procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide, full insert sequence, p | |
| S. | NOS2 | + | 64 | A_87_P009073 | U46504 | Chicken macrophage nitric oxide synthase mRNA. [U46504] | |
| S. | IL8 | - | 58 | *010230 | Y14971 | O73912 : (O73912) K60 protein precursor (CXC chemokine K60) | |
| S. | IL17A | + | 53 | A_87_P035017 | AY920750 | Gallus gallus interleukin 17 mRNA, complete cds. [AY920750] | |
| S. | CTLA4 | + | 47 | *019882 | DN853042 | XP_421960 : gi:50750341:ref:XP_421960.1: PREDICTED: similar to costimulatory molecule B7 receptor CD152 [Gallus gallus] | |
| S. | IL12RB2 | + | 23 | *000640 | AJ621939 | Q5GR16 : (Q5GR16) Interleukin 12 receptor beta 2 (Fragment) | |
| S. | PLK1 | + | 20 | *001748 | AJ720598 | Q5ZJ36 : (Q5ZJ36) Hypothetical protein | |
| S. | ROR1 | - | 13 | *000634 | AJ620298 | Q705C2 : (Q705C2) Tyrosine kinase orphan receptor 1 | |
| S. | LECT2 | - | 11 | *009802 | M29449 | O88803 : (O88803) Leukocyte cell-derived chemotaxin 2 precursor (Chondromodulin II) (ChM-II) | |
| S. | ABCA8 | - | 6 | *016305 | BU440826 | XP_415691 : gi:50757881:ref:XP_415691.1: PREDICTED: similar to ATP-binding cassette, sub-family A, member 10; ATP-binding cassette A10 [Gallus gallus] | |
| S. | TSPAN8 | - | 6 | *004228 | BX934864 | XP_416096 : gi:50728338:ref:XP_416096.1: PREDICTED: similar to Tm4sf3 protein [Gallus gallus] | |
| S. | COL5A2 | - | 6 | A_87_P001489 | TC224310 | Q86XF6 (Q86XF6) COL5A2 protein, partial (5%) [TC224310] | |
| R. | MMP9 | - | 63 | A_87_P037769 | AF222690 | Gallus gallus 75 kDa gelatinase mRNA, complete cds. [AF222690] | |
| 21dpi | R. | SFTPA1 | + | 38 | *000489 | AF411083 | Q90XB2 : (Q90XB2) Surfactant protein A precursor |
| R. | FBXW4 | - | 6 | *015952 | BU419266 | Q9JMJ2 : (Q9JMJ2) F-box/WD-repeat protein 4 (F-box and WD-40 domain protein 4) (Hagoromo protein) | |
| R. | CPN1 | - | 5 | *006641 | CR387490 | Q9EQV8 : (Q9EQV8) Carboxypeptidase N, polypeptide 1, 50kD | |
| S. | CD28 | + | 50 | *010136 | X67915 | P31043 : (P31043) T-cell-specific surface glycoprotein CD28 homolog precursor (CHT28) | |
| S. | CHRM4 | - | 37 | A_87_P009241 | NM_001031191 | Gallus gallus cholinergic receptor, muscarinic 4 (CHRM4), mRNA [NM_001031191] | |
| S. | F10 | - | 29 | *009605 | D00844 | P25155 : (P25155) Coagulation factor × precursor (Stuart factor) (Virus activating protease) (VAP) | |
| S. | WNT7A | - | 27 | A_87_P038155 | AB045629 | Gallus gallus mRNA for Wnt-7a, complete cds. [AB045629] | |
| S. | FMN2 | + | 12 | A_87_P005690 | TC203559 | AF218942 formin 2-like protein {Homo sapiens;}, partial (28%) [TC203559] | |
| S. | ATF6 | - | 8 | A_87_P023703 | BX931991 | Gallus gallus finished cDNA, clone ChEST222o13. [BX931991] | |
| S. | GLO1 | - | 6 | *004233 | BX934880 | XP_419481 : gi:50740506:ref:XP_419481.1: PREDICTED: similar to glyoxylase 1; glyoxalase 1 [Gallus gallus] | |
| S. | OPN4 | - | 5 | *002725 | AY882944 | XP_421494 : gi:50749124:ref:XP_421494.1: PREDICTED: similar to Opsin 4 (Melanopsin) [Gallus gallus] | |
| S. | ITGBL1 | - | 5 | *016603 | BU449144 | Q4VBJ0 : (Q4VBJ0) Integrin, beta-like 1 | |
T.Point: time point; No. Bio.: number of biofunctions involved; P.Name: Probe Name; S.Name: Systematic Name; R.: resistant genes; S.: susceptible genes; +: up-regulated; -:down-regulated.