Table 3.
Variant | CG1 | CG2b | mean | CG1 | CG2b | mean | CG1 | CG2b | mean | p-value |
---|---|---|---|---|---|---|---|---|---|---|
rs6269 | AA 47.0 ± 4.6 | 60.1 ± 3.7 | 53.6 ± 3.5 (n = 26) | AG 42.2 ± 4.7 | 55.7 ± 5.1 | 49.0 ± 4.8 (n = 44) | GG 36.6 ± 4.6 | 51.4 ± 5.3 | 44.0 ± 4.8 (n = 23) | < 0.01 |
rs4680 | AA 47.3 ± 4.2 | 60.3 ± 3.7 | 53.8 ± 3.4 (n = 33) | AG 40.8 ± 3.8 | 54.7 ± 4.5 | 47.8 ± 4.0 (n = 46) | GG 34.1 ± 4.1 | 49.1 ± 5.4 | 41.6 ± 4.5 (n = 14) | < 0.01 |
Note that due to the high linkage disequilibrium between rs6269, rs4633, and rs4680, in the replication cohort we assessed only rs6269 and rs4680, which are sufficient to differentiate between the 3 common activity haplotypes.