Table 4.
Transmission of risk allele (A) for TNFα-308 promoter SNP (rs1800629) in neonatal lupus (NL) trio cohort
Transmission Disequilibrium Test | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Mothers with NL Child | Mothers with Cardiac NL Child | Caucasian Mothers with Cardiac NL Child | ||||||||||
Nontransmitted | Nontransmitted | Nontransmitted | ||||||||||
Allele | A | G | Allele | A | G | Allele | A | G | ||||
Transmitted | A | 3 | 20 | 23 | A | 3 | 16 | 19 | A | 3 | 16 | 19 |
G | 3 | 24 | 27 | G | 2 | 21 | 23 | G | 2 | 21 | 23 | |
6 | 44 | 50 | 5 | 35 | 42 | 5 | 35 | 42 | ||||
OR=6.67 CI=(1.98–35.03) | OR=8.00 CI=(1.88–71.72) | OR=8.00 CI=(1.88–71.72) | ||||||||||
PTDT=3.93×10−4 | PTDT=9.67×10−4 | PTDT=9.67×10−4 | ||||||||||
Pedigree Disequilibrium Test | ||||||||||||
Mothers with NL Child | Mothers with Cardiac NL Child | Caucasian Mothers with Cardiac NL Child | ||||||||||
Allele | Transmitted | Nontransmitted | Allele | Transmitted | Nontransmitted | Allele | Transmitted | Nontransmitted | ||||
A | 31 | 9.0 | A | 25 | 7.4 | A | 24 | 7.3 | ||||
G | 51 | 72.0 | G | 43 | 60.6 | G | 40 | 56.7 | ||||
PMarginal=1.52×10−4 | PMarginal=5.44×10−4 | PMarginal=7.52×10−4 | ||||||||||
Number of Complete trios | 25 | Number of Complete trios | 21 | Number of Complete trios | 21 | |||||||
Number of Pedigrees | 43 | Number of Pedigrees | 35 | Number of Pedigrees | 32 |