Table 1C.
Nonredundant GenBank
|
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Cluster | ESTs per cluster | Best identity descriptor | Accession SW/TRb | E-value | C. elegans gene wormpep | |
1 | SS01556.cl | 31 | Drosophila melanogaster CG16995 protein | Q9VQA7 | 2e-13 | — |
2 | SS01540.cl | 23 | C. elegans protein id: CAB02955.1 | O62173 | 8e-54 | F15D3.6 |
3 | SS01145.cl | 22 | Dictyostelium discoideum SRF related protein | O76853 | 8e-14 | T05A10.1c |
4 | SS00011.cl | 22 | C. elegans lipase | O16380 | 3e-32 | K12B6.3 |
5 | SS01534.cl | 21 | Litomosoides sigmodontis SHP3, microfilarial sheath protein | Q25402 | 4e-25 | F55B11.3c |
6 | SS01532.cl | 21 | C. elegans MAP1A/1B, microtubule associated protein | Q09490 | 2e-65 | C32D5.9 |
7 | SS01528.cl | 20 | C. elegans tyrosine aminotransferase | Q93703 | 7e-105 | F42D1.2 |
8 | SS01517.cl | 17 | C. elegans HSP70, heat shock protein 70 | Q22758 | 4e-62 | T24H7.2 |
9 | SS01508.cl | 16 | C. elegans protein id: AAB65951.1 | O16458 | 2e-94 | F41E6.9 |
10 | SS01505.cl | 15 | C. elegans protein id: CAB03200.1 | P90845 | 4e-33 | F25B3.6 |
Note: The seven largest L3i-specific clusters appear in Table 1A
SW/TR is SWISS-PROT and TrEMBL Proteinknowledgebase (http://us.expasy.org/sprot/)
C. elegans homolog present but with a lower probability match than the best GenBank descriptor