Table 3.

Polymorphic Alleles in SCK1/SL1 VNTRs

	# Repeats	Size (bp)	N = 206	Frequency		# Repeats	Size (kb)	N = 206	Frequency
VNTR1	1.7	130 bp	2	0.010	VNTR5	29.0	1.65 kb	6	0.029
	2.7	190 bp	34	0.165*		30.0	1.70 kb	9	0.044
	3.7	250 bp	59	0.286		31.0	1.75 kb	5	0.024
	4.7	310 bp	35	0.170		33.0	1.95 kb	4	0.019
	5.7	370 bp	2	0.010		35.5	2.10 kb	2	0.010
	6.7	420 bp	1	0.005		37.3	2.20 kb*	16	0.078
	8.7	540 bp	2	0.010		38.3	2.25 kb	4	0.019
	9.7	615 bp	70	0.340		39.3	2.30 kb	4	0.019
	11.0	720 bp	1	0.005		41.0	2.40 kb	4	0.019
						42.0	2.45 kb	3	0.015
						43.0	2.50 kb	4	0.019
VNTR2	9.7	400 bp	4	0.019		44.9	2.55 kb	5	0.024
	12.7	500 bp	43	0.209		46.7	2.65 kb	21	0.102
	13.7	540 bp	12	0.058		47.7	2.80 kb	7	0.034
	14.7	570 bp	60	0.291		49.5	2.90 kb	5	0.024
	15.7	600 bp	80	0.388*		51.3	3.00 kb	17	0.083
	16.7	640 bp	4	0.019		53.0	3.10 kb	10	0.049
	17.7	680 bp	3	0.015		55.0	3.20 kb	4	0.019
						57.0	3.30 kb	6	0.029
						58.0	3.35 kb	4	0.019
VNTR3	12.9	370 bp	3	0.015		65.0	3.75 kb	2	0.010
	13.9	400 bp	59	0.286		69.0	4.00 kb	5	0.024
	14.9	430 bp	54	0.262		75.0	4.30 kb	25	0.121
	15.9	460 bp	3	0.015		77.0	4.40 kb	17	0.083
	18.9	560 bp	87	0.422*		83.0	4.70 kb	11	0.053
						85.0	4.80 kb	4	0.019
						87.0	4.90 kb	2	0.010
VNTR4	50.3	1.79 kb	3	0.015
	51.3	1.85 bp	185	0.898*
	60.3	2.30 kb	17	0.083	VNTR8	15.7	680 bp	11	0.053*
	63.3	2.45 kb	1	0.005		16.7	720 bp	195	0.947
VNTR9	4.7	420 bp	23	0.112	VNTR11	41.7	1.03 kb	2	0.010
	6.7	550 bp	10	0.049*		42.7	1.06 kb	2	0.010
	7.7	620 bp	173	0.840		43.7	1.08 kb	4	0.019
						44.7	1.10 kb	198	0.961*
VNTR10	11.0	750 bp	6	0.029
	11.7	800 bp	162	0.786*	VNTR12	16.8	670 bp	202	0.980*
	12.7	860 bp	2	0.010		18.8	730 bp	3	0.015
	16.0	1070 bp	36	0.175		19.8	760 bp	1	0.005

In bold are minisatellite alleles identified in a fosmid clone.

Asterisks show minisatellite alleles in a TAR isolate.