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. 2011 Jun 19;39(3):3123–3130. doi: 10.1007/s11033-011-1077-7

Table 4.

Results of gene–gene interactions analyzed by MDR method

Genes and rs numbers Testing balanced accuracya Cross validation consistencyb P valuec
MTHFD1_rs2236225 0.4442 4/10 0.9980
MTR_rs1805087, TCN2_rs1801198 0.5181 5/10 0.7260
MTHFD1_rs2236225, TCN2_rs1801198, BHMT2_rs625879 0.4852 7/10 0.9480
MTHFR_rs1801133, MTR_rs1805087, MTRR_rs1801394, BHMT2_rs526264 0.5074 5/10 0.8130

aTesting balanced accuracy of classification of cases and controls in the testing dataset calculated as (Sensitivity + Specificity)/2

bCross validation consistency is the number of times the model was selected as the best model after tenfold cross validation runs

cSignificance of accuracy, empirical P value based on 1,000 permutations