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. 2011 Sep 30;12:479. doi: 10.1186/1471-2164-12-479

Figure 4.

Figure 4

Correlations of RNA-Seq data with microarray and qRT-PCR data. (A) Comparison of normalized sequence coverage depth from RNA-Seq and absolute microarray fluorescence intensity. Shown is a plot of log2-transformation of RPKM for sample 2 (at 4.5 h) and raw microarray intensities for an equivalent sample (at 5 h) from Shi and Blaschek [13]. (B) Real time qRT-PCR verification of RNA-Seq results for selected genes (from sample 4, see also Additional file 15 Table S11).