Table 2.
Primers used in the study
| Transcripts | Sequence (5′ to 3′) | PCR product | EBV genomic region (Genbank or Virus) | Reference |
|---|---|---|---|---|
| Actin-F | TCCCTGGAGAAGAGCTACGA | 194 bp | None | Ghosh et al33 |
| Actin-R | AGCACTGTGTTGGCGTACAG | |||
| Thymidine kinase-F | TCCGGAGCCAGCTTCTCTCC | 275 bp | 131353-131334 (NC_007605) | Ghosh et al33 |
| Thymidine kinase-R | CGTGATTGTTGTTAGACCGG | 131079-131098 | ||
| EBER1-F | GGACCTACGCTGCCCTAGAGG | 166 bp | 6649-6631 (NC_007605) | Present study |
| EBER1-R | AAACATGCGGACCACCAGCTG | 6794-6774 | ||
| BGLF4-F | TGCGGAGTTGAGCCCGACGA | 263 bp | 111309-111290 (NC_007605) | Present study |
| BGLF4-R | CATACACGGCCCCGTAGCTC | 111047-111066 | ||
| Qp-F | AGGCGCGGGATAGCGTGCGCTACCGGA | 339 bp | 62426-62452 (B95-8) | Komano et al48 |
| Qp-R | TCCTCGTCCATGGTTATCAC | 108075-108056 | ||
| Cp-F | CACTACAAGACCTACGCCTCTCCATCCATC | 297 bp | 11425-11454 (B95-8) | Komano et al48 |
| Cp-R | TCTCCCCTAGGCCCTGAAGGTGAACCGCTT | 14832-14813, 17636-17626 | ||
| Wp-F | TCAGAGCGCCAGGAGTCCACACAAAT | 235 bp | 14384-14410 (B95-8) | Komano et al48 |
| Wp-R | TCTCCCCTAGGCCCTGAAGGTGAACCGCTT | 14832-14813, 17636-17626 |