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. 2011 Dec 12;158(2):570–589. doi: 10.1104/pp.111.186676

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© 2012 American Society of Plant Biologists. All rights reserved.

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Figure 1. — R/qtl output for the effect of 100 mm NaCl on the maximum germination without stratification. A, Pairwise recombination fractions. B, LOD profile comparison between MQM and Haley-Knott (scan.one) interval mapping. C, Genome-wide additive effect based on raw phenotype data. D, Genetic map showing the significant QTL markers. E, Interaction plot showing the effect-size comparison between markers MSAT305754 and MSAT518662 at the Sha (AA) and Bay-0 (BB) alleles. F, Circle plot showing epistatic interactions between all significant QTLs.