Skip to main content
. 2011 Dec 12;158(2):570–589. doi: 10.1104/pp.111.186676

Table III. Significant environment-specific QTL effects (P < 0.05).

Positive values for AUC and Gmax indicate a larger effect of the Sha allele, and negative values for AUC and Gmax indicate a larger effect of the Bay-0 allele. This is opposite for t50, t10, and U8416 values due to the inversed nature of these parameters. Environments are as mentioned in Table I, and loci are as indicated in Figure 3.

Locus 1-1
1-2
3-1
3-2
4-1
5-1
5-2
5-3
cM 9
50
5
44
24
14
63
83
Environment AUC Gmax t50 t10 U8416 AUC Gmax t50 t10 U8416 AUC Gmax t50 t10 U8416 AUC Gmax t50 t10 U8416 AUC Gmax t50 t10 U8416 AUC Gmax t50 t10 U8416 AUC Gmax t50 t10 U8416 AUC Gmax t50 t10 U8416
% h % h % h % h % h % h % h % h
AR.NS 1.3 −0.8 −2.0 −1.3 0.8 3.5 4.6 −1.8 −2.5 −1.2 −3.1 1.4 1.8 1.8 −2.0 −1.4 −1.6 2.8
AR.NS.ABA −1.6 −5.8 −1.4 −6.1 5.7 −2.5 −9.9 4.6 5.2 −4.6 −12.1 23.2 15.7 14.2
AR.NS.CD −1.5 −3.2 −6.8 2.5 3.1 1.4 5.3 9.0 −3.5 −2.1 −2.1 −2.9 −7.8 −3.5 −2.2 1.9 −2.8
AR.NS.Cold 0.9 −1.3 −1.3 1.2 −1.3 1.3 1.4 −1.6 −1.4 −1.3 1.0 −2.2 −1.3
AR.NS.Heat −3.5 −7.4 −1.8 −4.3 −5.8 2.3 6.1 −2.2 −4.2 2.8 5.0 −1.8 5.2 8.6
AR.NS.Mannitol −1.9 −1.9 −2.6 −2.9 2.5 1.8 2.2 3.4 11.7 −2.7 −2.0 −6.1 3.1 6.7 −3.3 −2.0 3.0 5.8 −2.3 −1.6 −3.4
AR.NS.NaCl −2.1 −7.8 −1.8 −2.0 −4.2 −6.8 2.5 2.0 1.7 3.9 10.4 −1.3 4.5 8.6 −3.6 −2.1 1.9 5.3 −1.7
AR.WS. 0.4 −0.8 0.6 0.5 0.4 −0.6 −0.7 −0.4 0.5 0.5 1.2 0.4 −1.3 −0.4 −0.7 1.2
AR.WS.ABA −2.1 −1.9 −4.8 −4.4 −7.2 2.7 6.0 −5.2 −8.7 2.5 1.9 −5.3 2.4 1.5 3.8 8.3 −12.2 −14.0 10.8 2.4 17.8
AR.WS.CD −1.5 −4.5 1.3 4.2 5.9 −4.8 −1.9 4.2 −2.7 1.8 1.4
AR.WS.Cold 1.1 1.7 −1.2 1.3 1.2 −1.4
AR.WS.Heat −1.6 −2.4 1.6 1.0 1.2 −3.5 −2.9 1.1 0.6 1.2 −4.6 −2.7 1.6 1.4 3.3 2.6 −2.2 −1.1 −0.8
AR.WS Mannitol −2.6 −2.3 1.7 1.3 1.6 0.8 0.9 −2.1 1.6 0.9 2.0 −2.2
AR.WS.NaCl −1.9 −4.4 0.9 −1.7 −4.6 −6.4 2.7 1.8 2.9 −4.8 −5.7 2.8 1.6 2.4 0.7 1.6 −3.1 1.8 1.3 6.5 9.1 −3.8 −1.5 −2.3 2.5 3.4 −1.4
Fresh.NS −2.6 −3.0 1.8 1.2 2.4 7.5 15.3 −2.4 −5.9 8.5 15.8 −2.8 −6.7 5.9 7.5 −3.0 −7.2 3.7 6.2 −4.9 −5.2 3.1
Fresh.NS.Cold 2.1 3.7 −4.2 −4.3 1.5 −2.1 4.5 2.8 5.1 −5.3 −7.3 −3.5 −4.2 2.2 6.5 −4.6 −5.5
Fresh.NS.Heat −4.6 2.8 −3.2 6.5 18.0 −3.2 −0.8 5.7 16.1 −3.6 −1.0 4.2 10.0 −6.6 −4.0 −1.2 5.2 9.0 −4.4 −1.0
Fresh.WS 0.6 −0.7 0.5 0.6 −0.8 0.6 0.5 0.9 0.9 −0.6 −0.6 −0.9 0.9 0.7 0.6 −1.2 0.9 2.2 1.0 −1.8 −0.6 −1.0 −0.9 0.8