Table I. The newly identified miRNA targets with transcription factor functions.
miRNA | Target Gene | Target Site (Nucleotides to the 5′ End) |
Target Gene Annotation | |
Start | End | |||
miR156 | TC80211 | 1,035 | 1,051 | MADS box transcription factor |
TC93255 | 1,163 | 1,180 | ZIM-like 1 (ZML1) | |
miR164 | TC67424 | 138 | 158 | Variant in methylation 1 (VIM1) |
TC79889 | 679 | 659 | ZFHD transcription factor | |
miR172 | TC104052 | 616 | 634 | MYB transcription factor |
TC76001 | 84 | 103 | WRKY DNA-binding protein | |
miR390 | TC75148 | 414 | 434 | K box transcription factor |
miR395 | TC109054 | 36 | 16 | ASIL transcription factor |
miR399 | TC82291 | 460 | 479 | Nuclear factor Y A3 (NF-YA3) transcription factor |
miR860 | TC68388 | 903 | 884 | IAA transcription factor |
miR6029 | TC73674 | 239 | 258 | VirE2-interacting protein 1 (VIP1) |
miR6034 | TC101312 | 1,025 | 1,043 | Basic helix-loop-helix family protein (BIM1) |