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. 2012 Feb 3;7(2):e30126. doi: 10.1371/journal.pone.0030126

Table 1. Genera frequencies in the Twins Clusters.

Rank Genus Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic Diff. C. Diff.
1 Bacteroides 17.5 5-6.8-8 21-22.6-25 35-38.8-43 7-8.3-11 46.3 29.2
2 Unknown 30.8 26-29.1-33 31-33.6-37 20-22.4-25 39-45.2-53 27.2 46.4
3 Faecalibacter. 10.0 12-13.8-16 8-8.8-10 12-13.8-16 3-4.0-5 14.9 55.8
4 Prevotella 0.60 4.2-5.18-6.3 0.2-0.22-0.3 0.1-0.14-0.2 0.2-0.40-0.7 5.6 59.4
5 Alistipes 2.33 1.5-1.86-2.4 3.5-4.02-4.7 1.4-1.66-2.0 0.7-0.99-1.4 4.2 62.0
6 Dorea 2.71 2.7-3.32-4.1 1.2-1.49-1.8 1.4-1.73-2.1 3.1-4.05-5.3 4.1 64.6
7 Ruminococcus 2.05 1.9-2.36-3.0 3.1-3.57-4.2 0.8-0.95-1.2 0.6-0.92-1.4 4.1 67.2
8 Oscillibacter 2.56 2.3-2.84-3.5 3.4-3.96-4.6 1.3-1.59-1.9 0.9-1.20-1.7 4.0 69.7
9 Roseburia 4.13 3.0-3.63-4.5 2.0-2.32-2.8 3.9-4.47-5.2 4.2-5.40-6.9 3.9 72.2
10 Subdoligran. 2.84 2.8-3.40-4.2 2.6-3.04-3.6 1.6-1.91-2.3 1.2-1.62-2.3 2.9 74.0
11 Collinsella 1.37 1.8-2.32-2.9 0.5-0.66-0.8 0.5-0.67-0.9 1.3-1.76-2.5 2.7 75.8
12 Eubacterium 1.03 1.9-2.47-3.1 0.3-0.40-0.5 0.4-0.52-0.7 0.8-1.16-1.6 2.7 77.5
13 Hespellia 1.04 0.4-0.54-0.8 0.5-0.65-0.8 0.5-0.69-0.9 1.4-1.95-2.6 2.1 78.8
14 Coprococcus 2.37 2.3-2.84-3.5 1.6-1.90-2.3 1.1-1.32-1.6 1.7-2.31-3.1 2.1 80.1
15 Streptococcus 1.12 0.9-1.21-1.6 0.4-0.57-0.7 0.5-0.62-0.8 1.2-1.65-2.2 1.7 81.2
16 Coprobacillus 1.13 0.6-0.77-1.1 0.8-0.95-1.2 0.5-0.59-0.8 1.1-1.58-2.2 1.5 82.2
17 Catenibacterium 0.35 0.8-1.09-1.5 0.1-0.09-0.2 0.1-0.15-0.2 0.2-0.30-0.6 1.2 82.9
18 Eggerthella 0.47 0.1-0.24-0.4 0.2-0.30-0.4 0.2-0.22-0.3 0.7-1.00-1.4 1.2 83.7
19 Clostridium 0.74 0.5-0.68-0.9 0.3-0.42-0.6 0.3-0.39-0.5 0.7-1.03-1.5 1.0 84.3
20 Anaerotruncus 1.02 0.8-1.07-1.4 0.7-0.85-1.1 0.4-0.52-0.7 0.5-0.76-1.1 1.0 84.9
21 Odoribacter 0.67 0.6-0.77-1.0 0.5-0.62-0.8 0.2-0.32-0.4 0.1-0.21-0.4 1.0 85.6
22 Barnesiella 0.56 0.5-0.71-1.0 0.5-0.60-0.8 0.2-0.22-0.3 0.1-0.13-0.3 1.0 86.2
23 Megasphaera 0.38 0.5-0.68-1.0 0.1-0.11-0.2 0.1-0.20-0.3 0.3-0.54-0.9 0.9 86.7
24 Paraprevotella 0.29 0.5-0.71-1.0 0.1-0.11-0.2 0.1-0.10-0.2 0.1-0.18-0.4 0.9 87.3
25 Lactobacillus 0.29 0.4-0.60-0.9 0.1-0.12-0.2 0.0-0.08-0.1 0.2-0.40-0.7 0.8 87.8
26 Butyricimonas 0.42 0.4-0.58-0.8 0.2-0.30-0.4 0.1-0.20-0.3 0.1-0.13-0.3 0.8 88.3
27 Butyricicoccus 0.87 0.6-0.79-1.1 0.4-0.47-0.6 0.5-0.60-0.8 0.6-0.84-1.2 0.8 88.8
28 Lactonifactor 0.63 0.5-0.65-0.9 0.3-0.35-0.5 0.3-0.34-0.5 0.6-0.81-1.2 0.8 89.3
29 Parabacteroides 0.77 0.4-0.59-0.8 0.5-0.64-0.8 0.3-0.40-0.5 0.5-0.68-1.0 0.8 89.8
30 Dialister 0.57 0.3-0.49-0.7 0.2-0.27-0.4 0.3-0.42-0.6 0.5-0.78-1.2 0.7 90.2

Percentage relative abundance of the first 30 out of 131 genera in the estimate of the mean of the reference single Dirichlet component, Inline graphic, and the four Dirichlet mixture components, Inline graphic fitted to the Twins data. For the mixture components the upper and lower 95% credible intervals are also given in the format (lower-MPE-upper). These are calculated as the maximum posterior estimate minus/plus two standard deviations as calculated from the inverse Hessian. Genera are ranked in order of their contribution to the total mean difference of 158%, split 34%, 26%, 51% and 47% across components, and the cumulative fraction of this difference accounted for given in the last column in the table.