Table 3.
Associations of NAT1, NAT2, and EPXH1 polymorphisms with RA in African Americans based on cumulative smoking history; measures of gene-smoking interaction*
Gene/polymorphism | Minor allele status | Smoking history | Cases (no.) | Controls (no.) | O.R. | 95% C.I. | P-value |
---|---|---|---|---|---|---|---|
NAT1 | |||||||
rs11203942 | Absent | Never, < 10py | 195 (28.6) | 76 (30.6) | 1.00 | ---- | ---- |
Present | Never, < 10py | 295 (43.3) | 125 (50.4) | 0.91 | (0.65, 1.28) | 0.58 | |
Absent | ≥ 10py | 76 (11.2) | 25 (10.1) | 1.22 | (0.72, 2.08) | 0.46 | |
Present | ≥ 10py | 115 (16.9) | 22 (8.9) | 2.23 | (1.30, 3.82) | 0.004 | |
Pmult = 0.06 AP (95% CI) = 0.49 (0.12 to 0.87) Padd = 0.009 |
|||||||
NAT2 | |||||||
rs9987109 | Absent | Never, < 10py | 245 (38.1) | 93 (36.3) | 1.00 | ---- | ---- |
Present | Never, < 10py | 220 (34.2) | 116 (45.3) | 0.73 | (0.52, 1.01) | 0.06 | |
Absent | ≥ 10py | 85 (13.2) | 31 (12.1) | 1.07 | (0.66, 1.73) | 0.79 | |
Present | ≥ 10py | 93 (14.5) | 16 (6.3) | 2.42 | (1.34, 4.38) | 0.003 | |
Pmult = 0.003 AP (95% CI) = 0.67 (0.39 to 0.95) Padd = 0.000003 |
|||||||
rs1208 | Absent | Never, < 10py | 162 (23.6) | 75 (28.7) | 1.00 | ---- | ---- |
Present | Never, < 10py | 334 (48.8) | 139 (53.3) | 1.07 | (0.76, 1.51) | 0.69 | |
Absent | ≥ 10py | 60 (8.8) | 26 (10.0) | 1.10 | (0.64, 1.90) | 0.73 | |
Present | ≥ 10py | 129 (18.8) | 21 (8.0) | 3.03 | (1.76, 5.23) | 0.00006 | |
Pmult = 0.01 AP (95% CI) = 0.61 (0.34 to 0.89) Padd = 0.00001 |
|||||||
rs721399 | Absent | Never, < 10py | 156 (24.1) | 85 (33.9) | 1.00 | ---- | ---- |
Present | Never, < 10py | 313 (48.3) | 120 (47.8) | 1.45 | (1.03, 2.03) | 0.03 | |
Absent | ≥ 10py | 63 (9.7) | 9 (3.6) | 4.13 | (1.94, 8.78) | 0.0002 | |
Present | ≥ 10py | 116 (17.9) | 37 (14.7) | 1.83 | (1.15, 2.91) | 0.01 | |
Pmult = 0.008 AP (95% CI)= −1.50 (−3.35 to 0.35) Padd = 0.11 |
|||||||
EPXH1 | |||||||
rs2260863 | Absent | Never, < 10py | 142 (22.0) | 74 (29.0) | 1.00 | ---- | ---- |
Present | Never, < 10py | 320 (49.7) | 135 (52.9) | 1.23 | (0.87, 1.74) | 0.24 | |
Absent | ≥ 10py | 66 (10.2) | 10 (3.9) | 3.68 | (1.77, 7.66) | 0 | |
Present | ≥ 10py | 116 (18.0) | 36 (14.1) | 1.76 | (1.09, 2.83) | 0.02 | |
Pmult = 0.03 AP (95% CI) = −1.22 (−2.87 to 0.42) Padd = 0.15 |
NAT = N-acetyltransferase, EPXH1 = epoxide hydrolase; AP = attributable proportion due to interaction; ORs are age- and gender-adjusted