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. Author manuscript; available in PMC: 2013 Feb 1.
Published in final edited form as: IEEE Trans Med Imaging. 2011 Aug 8;31(2):153–163. doi: 10.1109/TMI.2011.2163944

TABLE I.

Peer-reviewed journal articles depending on unreliable surrogates

No. Publication Summary of Problematic Methodology
1 R. W. So, T. W. Tang, and A. C. Chung, “Non-rigid image registration of brain magnetic resonance images using graph-cuts,” Pattern Recognition, vol. 44, no. 10–11, pp. 2081–2092, 2011. Claims “consistently higher registration accuracy” of proposed method based on tissue overlap scores, despite recovering known deformations.
2 S. Liao and A.C.S. Chung, “Feature based nonrigid brain MR image registration with symmetric alpha stable filters,” IEEE Transactions on Medical Imaging, vol. 29, no. 1, pp. 106–119, 2010. Uses tissue overlap scores to compare new vs. existing registration algorithms.
3 A.M. Siddiqui, A. Masood, and M. Saleem, “A locally constrained radial basis function for registration and warping of images,” Pattern Recognition Letters, vol. 30, no. 4, pp. 377–390, 2009. Compares transformation models using post-registration values of CC, MSD, and MI similarity measures.
4 H. Nam, R.A. Renaut, K. Chen, H. Guo, and G.E. Farin, “Improved inter-modality image registration using normalized mutual information with coarse-binned histograms,” Communications in Numerical Methods in Engineering, vol. 25, no. 6, pp. 583–595, 2009. Applies known deformations, but then only uses intensity L2 error for comparison of registration results.
5 J. Larrey-Ruiz, R. Verdú-Monedero, and J. Morales-Sánchez, “A fourier domain framework for variational image registration,” Journal of Mathematical Imaging and Vision, vol. 32, no. 1, pp. 57–72, 2008. Applies known deformations, but then only uses intensity PSNR, MI, and CR for comparison of registration results.
6 P. Zhilkin, M.E. Alexander, and J. Sun, “Nonlinear registration using variational principle for mutual information,” Pattern Recognition, vol. 41, no. 8, pp. 2493–2502, 2008. Uses MSD and MI and measures of registration accuracy.
7 C. Frohn-Schauf, S. Henn, and K. Witsch, “Multigrid based total variation image registration,” Computing and Visualization in Science, vol. 11, no. 2, pp. 101–113, 2008. Compares registration methods based on post-registration L2 image differences.
8 D.C. Paquin, D. Levy, and L. Xing, “Multiscale deformable registration of noisy medical images,” Mathematical Biosciences and Engineering, vol. 5, no. 1, pp. 125–144, 2008. Uses post-registration correlation coefficient to “demonstrate the accuracy” of the proposed registration method.
9 D.C. Paquin, D. Levy, and L. Xing, “Hybrid landmark and multiscale deformable registration,” Mathematical Biosciences and Engineering, vol. 4, no. 4, pp. 711–737, 2007. Uses difference images, CC and MSD to demonstrate registration “accuracy,” even though in one example 20 landmarks are used to drive the registration.
10 S. Tang and T. Jiang, “Nonrigid registration of medical image by linear singular blending techniques,” Pattern Recognition Letters, vol. 25, no. 4, pp. 399–405, 2004. Uses post-registration SSD and MI to “evaluate […] accuracy” of proposed registration method against others.
11 B.C. Vemuri, J. Ye, Y. Chen, and C.M. Leonard, “Image registration via level-set motion: Applications to atlas-based segmentation,” Medical Image Analysis, vol. 7, no. 1, pp. 1–20, 2003. Shows “difference image between evolved/transformed source image and the target image as a qualitative measure of the accuracy of the registration algorithm”; also uses CC to compare with other registration methods.

PSNR = Peak Signal to Noise Ratio; CR = Correlation Ratio; CC = Correlation Coefficient; SSD = Sum of Squared Differences; MI = Mutual Information