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. 2012 Feb;67(2):113–123. doi: 10.6061/clinics/2012(02)05

Table 2.

Richness estimators, diversity indices, and coverage of bacterial 16S rRNA gene sequences from 2-, 7-, and 30-day-old neonates (the OTU was defined as a ≥95% similarity cutoff).

Sample No. of sequencesa OTUs Richness estimators Diversity indices Coverage (%)
ACE Chao1 Simpson Shannon
2-day-old 421 28 67 48 0.440 1.516 96.9
7-day-old 304 17 18 17 0.246 1.891 99.9
30-day-old 352 27 31 29 0.132 2.437 98.5

a – the number of forward-oriented clone inserts (5′-3′) after excluding those of weak quality and suspected chimeras.