Abstract
The title compound, C7H6N2O4, is approximately planar (r.m.s. deviation = 0.026 Å for the 13 non-H atoms). The molecular structure is stabilized by intramolecular N—H⋯O hydrogen bonds, which generate S(6) ring motifs. In the crystal, molecules are linked via intermolecular N—H⋯O, O—H⋯O and C—H⋯O hydrogen bonds into a three-dimensional network.
Related literature
For general background to the title compound and related structures, see: Win et al. (2010 ▶, 2011a
▶,b
▶,c
▶). For standard bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used in the the data collection, see: Cosier & Glazer (1986 ▶).
Experimental
Crystal data
C7H6N2O4
M r = 182.14
Monoclinic,
a = 9.0231 (3) Å
b = 7.4338 (2) Å
c = 11.0392 (4) Å
β = 92.114 (1)°
V = 739.96 (4) Å3
Z = 4
Mo Kα radiation
μ = 0.14 mm−1
T = 100 K
0.34 × 0.26 × 0.16 mm
Data collection
Bruker SMART APEXII CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.956, T max = 0.979
22297 measured reflections
3247 independent reflections
2707 reflections with I > 2σ(I)
R int = 0.030
Refinement
R[F 2 > 2σ(F 2)] = 0.042
wR(F 2) = 0.121
S = 1.04
3247 reflections
130 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.55 e Å−3
Δρmin = −0.33 e Å−3
Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812002036/qm2050sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812002036/qm2050Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812002036/qm2050Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N2—H1N2⋯O2 | 0.892 (17) | 1.958 (16) | 2.6082 (11) | 128.5 (13) |
| N2—H1N2⋯O1i | 0.892 (17) | 2.499 (17) | 3.2885 (12) | 147.8 (14) |
| N2—H2N2⋯O3 | 0.872 (15) | 1.982 (16) | 2.6582 (10) | 133.4 (14) |
| O4—H1O4⋯O3ii | 0.83 (2) | 1.81 (2) | 2.6397 (10) | 176.2 (17) |
| C3—H3A⋯O1iii | 0.95 | 2.49 | 3.4349 (12) | 176 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
The authors would like to thank Universiti Tunku Abdul Rahman (UTAR) for the UTAR Research Fund (project No. IPSR/RMC/UTARRF/C1-11/C07) and Universiti Sains Malaysia (USM) for financial support as well as technical assistance and facilities. HKF and CKQ also thank USM for the Research University Grant (No. 1001/PFIZIK/811160).
supplementary crystallographic information
Comment
In the study of organotin(IV) carboxylate complexes, 2-amino-5-nitrobenzoic, 2-amino-3-nitrobenzoic, 4-amino-3-nitrobenzoic and 5-amino-2-nitrobenzoic acids have been utilized in the synthesis work (Win et al., 2010, 2011a, 2011b, 2011c). The carboxylate anions of the acids are found to be bonded to tin(IV) atom moieties in both a monodentate and a bidentate manner resulting in structural diversity for organotin(IV) carboxylate complexes (Win et al., 2010, 2011a, 2011b, 2011c).
The title compound, Fig.1, is approximately planar (r.m.s. deviation = 0.026 Å for the 13 non-H atoms). Bond lengths (Allen et al., 1987) and angles are within normal ranges and are comparable to related structures (Win et al., 2010, 2011a, 2011b, 2011c). The molecular structure is stabilized by intramolecular N2–H1N2···O2 and N2–H2N2···O3 hydrogen bonds (Table 1), which generate S(6) ring motifs (Fig. 1, Bernstein et al., 1995).
In the crystal structure, Fig. 2, molecules are linked via intermolecular N2–H1N2···O1, O4–H1O4···O3 and C3–H3A···O1 hydrogen bonds (Table 1) into a three-dimensional network.
Experimental
The attempt to prepare organotin(IV) carboxylate complexes by heating under reflux the mixture of 2-amino-3-nitrobenzoic acid (2 mmol) and dimethyltin(IV) oxide (4 mmol) for 4 h in 50 ml of methanol was unsuccessful. The resulting orange solution was filtered and orange crystals were obtained after 2 weeks. Unfortunately, the crystals obtained were found to be the starting material (2-amino-3-nitrobenzoic acid) with the melting point of 482 K.
Refinement
Atoms H1O4, H1N2 and H2N2 were located in a difference Fourier map and refined freely with O-H = 0.83 (2) Å and N-H = 0.875 (18) and 0.893 (17) Å. The remaining H atoms were positioned geometrically and refined using a riding model with C–H = 0.95 Å and Uiso(H) = 1.2 Ueq(C).
Figures
Fig. 1.
The molecular structure of the title compound showing 50% probability displacement ellipsoids for non-H atoms. Intramolecular hydrogen bonds are shown as dashed lines.
Fig. 2.
The crystal structure of the title compound, viewed along the b axis. H atoms not involved in hydrogen bonds (dashed lines) have been omitted for clarity.
Crystal data
| C7H6N2O4 | F(000) = 376 |
| Mr = 182.14 | Dx = 1.635 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 9956 reflections |
| a = 9.0231 (3) Å | θ = 2.9–34.8° |
| b = 7.4338 (2) Å | µ = 0.14 mm−1 |
| c = 11.0392 (4) Å | T = 100 K |
| β = 92.114 (1)° | Block, orange |
| V = 739.96 (4) Å3 | 0.34 × 0.26 × 0.16 mm |
| Z = 4 |
Data collection
| Bruker SMART APEXII CCD area-detector diffractometer | 3247 independent reflections |
| Radiation source: fine-focus sealed tube | 2707 reflections with I > 2σ(I) |
| graphite | Rint = 0.030 |
| φ and ω scans | θmax = 35.0°, θmin = 2.3° |
| Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −14→12 |
| Tmin = 0.956, Tmax = 0.979 | k = −11→11 |
| 22297 measured reflections | l = −17→17 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.121 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0662P)2 + 0.1903P] where P = (Fo2 + 2Fc2)/3 |
| 3247 reflections | (Δ/σ)max = 0.001 |
| 130 parameters | Δρmax = 0.55 e Å−3 |
| 0 restraints | Δρmin = −0.33 e Å−3 |
Special details
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 1.00882 (10) | 0.85440 (11) | 0.40698 (8) | 0.03096 (19) | |
| O2 | 0.99701 (8) | 0.61460 (10) | 0.29827 (6) | 0.02030 (14) | |
| O3 | 0.62645 (7) | 0.11784 (9) | 0.43650 (6) | 0.01909 (14) | |
| O4 | 0.51199 (8) | 0.18983 (10) | 0.60595 (6) | 0.01981 (14) | |
| N1 | 0.95660 (8) | 0.70510 (10) | 0.38522 (6) | 0.01587 (14) | |
| N2 | 0.81247 (9) | 0.35687 (11) | 0.34730 (7) | 0.01954 (16) | |
| C1 | 0.64687 (9) | 0.51128 (12) | 0.62950 (7) | 0.01552 (15) | |
| H1A | 0.5784 | 0.4697 | 0.6865 | 0.019* | |
| C2 | 0.71159 (10) | 0.67982 (12) | 0.64617 (8) | 0.01749 (16) | |
| H2A | 0.6870 | 0.7528 | 0.7131 | 0.021* | |
| C3 | 0.81229 (9) | 0.73922 (12) | 0.56356 (7) | 0.01620 (15) | |
| H3A | 0.8579 | 0.8536 | 0.5742 | 0.019* | |
| C4 | 0.84738 (9) | 0.63239 (11) | 0.46482 (7) | 0.01390 (14) | |
| C5 | 0.78217 (8) | 0.45981 (11) | 0.44292 (7) | 0.01334 (14) | |
| C6 | 0.67970 (9) | 0.40152 (11) | 0.53140 (7) | 0.01354 (14) | |
| C7 | 0.60572 (9) | 0.22530 (11) | 0.51976 (7) | 0.01458 (15) | |
| H1N2 | 0.8797 (19) | 0.393 (2) | 0.2953 (15) | 0.034 (4)* | |
| H2N2 | 0.7714 (18) | 0.251 (2) | 0.3400 (14) | 0.033 (4)* | |
| H1O4 | 0.471 (2) | 0.092 (3) | 0.5901 (16) | 0.044 (5)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0415 (4) | 0.0181 (3) | 0.0343 (4) | −0.0153 (3) | 0.0144 (3) | −0.0043 (3) |
| O2 | 0.0229 (3) | 0.0216 (3) | 0.0168 (3) | −0.0046 (2) | 0.0065 (2) | −0.0007 (2) |
| O3 | 0.0214 (3) | 0.0154 (3) | 0.0210 (3) | −0.0059 (2) | 0.0076 (2) | −0.0043 (2) |
| O4 | 0.0231 (3) | 0.0189 (3) | 0.0180 (3) | −0.0087 (2) | 0.0080 (2) | −0.0028 (2) |
| N1 | 0.0173 (3) | 0.0151 (3) | 0.0153 (3) | −0.0030 (2) | 0.0017 (2) | 0.0023 (2) |
| N2 | 0.0221 (3) | 0.0175 (3) | 0.0197 (3) | −0.0068 (3) | 0.0094 (3) | −0.0058 (3) |
| C1 | 0.0162 (3) | 0.0166 (3) | 0.0139 (3) | −0.0015 (3) | 0.0025 (2) | −0.0015 (3) |
| C2 | 0.0198 (3) | 0.0165 (4) | 0.0163 (3) | −0.0011 (3) | 0.0029 (3) | −0.0036 (3) |
| C3 | 0.0179 (3) | 0.0138 (3) | 0.0169 (3) | −0.0013 (3) | 0.0008 (3) | −0.0014 (3) |
| C4 | 0.0143 (3) | 0.0133 (3) | 0.0142 (3) | −0.0016 (2) | 0.0016 (2) | 0.0009 (2) |
| C5 | 0.0135 (3) | 0.0134 (3) | 0.0132 (3) | −0.0007 (2) | 0.0019 (2) | −0.0003 (2) |
| C6 | 0.0135 (3) | 0.0128 (3) | 0.0144 (3) | −0.0016 (2) | 0.0021 (2) | −0.0007 (2) |
| C7 | 0.0143 (3) | 0.0145 (3) | 0.0151 (3) | −0.0025 (3) | 0.0024 (2) | 0.0003 (3) |
Geometric parameters (Å, °)
| O1—N1 | 1.2260 (10) | C1—C6 | 1.3964 (11) |
| O2—N1 | 1.2380 (10) | C1—H1A | 0.9500 |
| O3—C7 | 1.2371 (10) | C2—C3 | 1.3832 (12) |
| O4—C7 | 1.3227 (10) | C2—H2A | 0.9500 |
| O4—H1O4 | 0.83 (2) | C3—C4 | 1.3945 (11) |
| N1—C4 | 1.4490 (10) | C3—H3A | 0.9500 |
| N2—C5 | 1.3401 (11) | C4—C5 | 1.4283 (11) |
| N2—H1N2 | 0.893 (17) | C5—C6 | 1.4364 (11) |
| N2—H2N2 | 0.875 (18) | C6—C7 | 1.4737 (11) |
| C1—C2 | 1.3916 (12) | ||
| C7—O4—H1O4 | 108.3 (12) | C2—C3—H3A | 119.8 |
| O1—N1—O2 | 121.45 (7) | C4—C3—H3A | 119.8 |
| O1—N1—C4 | 118.94 (7) | C3—C4—C5 | 122.67 (7) |
| O2—N1—C4 | 119.59 (7) | C3—C4—N1 | 116.15 (7) |
| C5—N2—H1N2 | 119.8 (11) | C5—C4—N1 | 121.17 (7) |
| C5—N2—H2N2 | 119.3 (10) | N2—C5—C4 | 123.47 (7) |
| H1N2—N2—H2N2 | 120.7 (15) | N2—C5—C6 | 121.24 (7) |
| C2—C1—C6 | 121.91 (7) | C4—C5—C6 | 115.30 (7) |
| C2—C1—H1A | 119.0 | C1—C6—C5 | 120.75 (7) |
| C6—C1—H1A | 119.0 | C1—C6—C7 | 118.60 (7) |
| C3—C2—C1 | 118.87 (8) | C5—C6—C7 | 120.64 (7) |
| C3—C2—H2A | 120.6 | O3—C7—O4 | 121.60 (8) |
| C1—C2—H2A | 120.6 | O3—C7—C6 | 123.94 (7) |
| C2—C3—C4 | 120.47 (8) | O4—C7—C6 | 114.46 (7) |
| C6—C1—C2—C3 | −0.58 (13) | N1—C4—C5—C6 | 177.80 (7) |
| C1—C2—C3—C4 | 0.47 (13) | C2—C1—C6—C5 | −0.28 (13) |
| C2—C3—C4—C5 | 0.49 (13) | C2—C1—C6—C7 | −179.61 (8) |
| C2—C3—C4—N1 | −178.63 (8) | N2—C5—C6—C1 | −178.81 (8) |
| O1—N1—C4—C3 | −1.42 (12) | C4—C5—C6—C1 | 1.16 (11) |
| O2—N1—C4—C3 | 177.38 (7) | N2—C5—C6—C7 | 0.50 (13) |
| O1—N1—C4—C5 | 179.46 (8) | C4—C5—C6—C7 | −179.53 (7) |
| O2—N1—C4—C5 | −1.75 (12) | C1—C6—C7—O3 | 179.89 (8) |
| C3—C4—C5—N2 | 178.69 (8) | C5—C6—C7—O3 | 0.55 (13) |
| N1—C4—C5—N2 | −2.24 (13) | C1—C6—C7—O4 | 0.60 (11) |
| C3—C4—C5—C6 | −1.28 (12) | C5—C6—C7—O4 | −178.73 (7) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H1N2···O2 | 0.892 (17) | 1.958 (16) | 2.6082 (11) | 128.5 (13) |
| N2—H1N2···O1i | 0.892 (17) | 2.499 (17) | 3.2885 (12) | 147.8 (14) |
| N2—H2N2···O3 | 0.872 (15) | 1.982 (16) | 2.6582 (10) | 133.4 (14) |
| O4—H1O4···O3ii | 0.83 (2) | 1.81 (2) | 2.6397 (10) | 176.2 (17) |
| C3—H3A···O1iii | 0.95 | 2.49 | 3.4349 (12) | 176 |
Symmetry codes: (i) −x+2, y−1/2, −z+1/2; (ii) −x+1, −y, −z+1; (iii) −x+2, −y+2, −z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: QM2050).
References
- Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
- Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573.
- Bruker (2009). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
- Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107.
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- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
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- Win, Y.-F., Choong, C.-S., Teoh, S.-G., Goh, J. H. & Fun, H.-K. (2010). Acta Cryst. E66, m1406–m1407. [DOI] [PMC free article] [PubMed]
- Win, Y.-F., Choong, C.-S., Teoh, S.-G., Quah, C. K. & Fun, H.-K. (2011b). Acta Cryst. E67, m1276–m1277. [DOI] [PMC free article] [PubMed]
- Win, Y.-F., Choong, C.-S., Teoh, S.-G., Yeap, C. S. & Fun, H.-K. (2011c). Acta Cryst. E67, m1114–m1115. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812002036/qm2050sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812002036/qm2050Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812002036/qm2050Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


