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. 2011 Jul 1;1(2):85–92. doi: 10.1534/g3.111.000125

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Copyright © 2011 Torres et al.

This is an open access article distributed under the terms of the Creative Commons Attribution Unported License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Consensus sequences of CL14 and CL34 repeats inferred from fragments reconstructed from the most frequent 17-mers (CL14) or 20-mers (CL34) detected in 454 sequence reads. The consensus is displayed as sequence logo where the height of the letters corresponds to frequencies of corresponding k-mers. Major sequence variants are displayed along with the prevailing bases. The CL14 region conserved in other Solanum and Nicotiana satellite repeats is underlined. Detailed information about reconstructed fragments used to create the consensus logos are provided as Figure S1.