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. 2011 Aug 1;1(3):219–231. doi: 10.1534/g3.111.000505

Table 1 . Multicopy suppressors identified by MSP.

Locus Log2 Ratio Average Ratio Confirmed Suppressor
Glyoxal
 GLO1;YML003W 2.52,3.25 2.88 GLO1
 YDR366C;YDR367W;YPR1;XRS2 3.29,2.07,2.20,2.37 2.48 YPR1
 YMR317W;ADH6 2.86,2.04 2.45 ADH6
 PBN1;LRE1 2.13,2.35 2.24 ND
Glyoxal + isonicotinamide
 PBN1;LRE1 4.81,4.74 4.78 ND
 YDR366C;YDR367W;YPR1;XRS2 5.05,4.14,4.53,4.73 4.61 YPR1
 YMR317W;ADH6 4.73,4.49 4.61 ADH6
 MRPL28;STP1 3.07,4.24 3.66 STP1
 MED8;SOY1;MSI1;PGI1 4.25,4.09,3.68,2.60 3.65 MED8
 YML007C-A;YAP1;GIS4;[tS(AGA)M];TRM12;GLO1;YML003W 2.40,2.46,2.33,0.00,4.90,5.80,6.43 3.47 GLO1
 THR1;PPA1;RPN1 3.16,3.83,3.11 3.37 THR1
 ZDS2;YML108W;PML39 3.60,3.48,2.86 3.31 ZDS2
 NST1;RHO2 2.88,3.58 3.23 RHO2
 YGR125W;YGR126W 2.42,3.66 3.04 YGR126W
 FBP26;VPS35 2.95,2.96 2.96 ND
 CCC2;[YDR271C];GLO2;DON1 2.94,0.00,4.38,4.04 2.84 GLO2
 YGL036W;MIG1 3.38,2.26 2.82 ND
 LCP5;YER128W 2.94,2.65 2.79 ND
 SSL1;SSK1 2.50,3.09 2.79 SSK1
 MIG2;SIP2 2.56,3.00 2.78 MIG2
 GIS3;IOC2 2.14,3.39 2.77 GIS3
 BUD22;ERG5;SOK2 2.40,2.76,2.91 2.69 ND
 STB1;KRI1 2.91,2.40 2.66 ND
 YKR023W;DBP7 2.73,2.45 2.59 ND
 TRR2;CDC12 2.55,2.52 2.54 ND
 NIP7;SRP72 2.57,2.44 2.50 ND
 ALG12;SSK2 2.00,2.79 2.40 ND
 RBA50;[snR84];HLR1;QCR7;APA2 3.36,0.00,3.30,3.04,2.19 2.38 HLR1
 YGR016W;YGR017W 2.42,2.18 2.30 ND
 BSP1;YPR172W;VPS4 2.14,2.38,2.39 2.30 ND
 DDP1;YOR164C 2.27,2.29 2.28 ND
 CBS1;[YDL068W];COX9 2.00,0.00,2.48 1.49 ND
Singletons
 DAM1 3.55 ND
 MTH1 3.10 ND
 CDC34 3.00 ND
 BUD6 2.90 ND
 PBS2 2.90 PBS2
 RPI1 2.87 ND
 SEC6 2.85 ND
 YPT7 2.83 ND
 DNA2 2.82 ND
 GRE3 2.70 GRE3

Syntenic genes identified by MSP screen. Singletons are genes that do not have neighboring genes with high log2 ratios. ORFs in brackets [] are not present on the microarray and thus not assessed by MSP. ND, not tested by single ORF analysis.