Table 6 . Distribution of SNPs among the supercontigs.
| Strain | Contig 1 | Contig 2 | Contig 3 | Contig 4 | Contig 5 | Contig 6 | Contig 7 | Contigs > 7 |
|---|---|---|---|---|---|---|---|---|
| 106 | 5044 | 947 | 3607 | 2250 | 853 | 391 | 9186 | 1301 |
| 305 | 38046 | 2537 | 8514 | 1019 | 26797 | 857 | 8075 | 4350 |
| 309 | 4943 | 2055 | 891 | 592 | 896 | 454 | 604 | 2839 |
| 322 | 29658 | 7256 | 28243 | 12754 | 24790 | 16428 | 22415 | 946 |
| 821 | 45205 | 12122 | 16891 | 41336 | 15980 | 30781 | 19517 | 6514 |
| 1211 | 4379 | 2207 | 4267 | 1635 | 1094 | 1608 | 3633 | 1670 |
| 1303 | 7227 | 13847 | 10817 | 4606 | 5237 | 12333 | 3341 | 1947 |
| 1363 | 43626 | 21549 | 19525 | 8625 | 32371 | 3402 | 17307 | 236 |
| 2261 | 1304 | 789 | 10200 | 3545 | 261 | 10966 | 15258 | 2516 |
| 3114 | 2725 | 2165 | 27516 | 1868 | 1614 | 1710 | 1731 | 1756 |
| 3246 | 7811 | 845 | 792 | 2606 | 6415 | 482 | 547 | 2035 |
| 3562 | 9178 | 4064 | 19381 | 28334 | 20810 | 13947 | 8024 | 2795 |
| 3564 | 5492 | 3142 | 1510 | 4691 | 16787 | 12046 | 1828 | 2485 |
| 3566 | 8701 | 5056 | 1402 | 9660 | 4716 | 1698 | 1570 | 4713 |
| 3831 | 2410 | 1584 | 6176 | 1187 | 2824 | 1177 | 5243 | 2360 |
| 3921 | 16641 | 2307 | 17416 | 9018 | 14521 | 5537 | 12038 | 2833 |
| 7022 | 32843 | 3897 | 1749 | 3105 | 11562 | 11989 | 10164 | 3682 |
| 7035 | 6040 | 1396 | 3145 | 3668 | 675 | 668 | 869 | 2026 |