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. 2012 Feb 10;7(2):e30308. doi: 10.1371/journal.pone.0030308

Table 2. GSEA analysis of published gene sets.

PATHWAY/GENE SET SIZEa ESb NESc p-val FDR CSd REFe
LS vs NL:
PSORIASIS_SF_UP 551 0.88 3.89 0.000 0.000 0.86 [20]
PSORIASIS_SF_DOWN 680 −0.83 −4.29 0.000 0.000
Relapse vs Week 12:
PSORIASIS_SF_UP 569 0.85 4.26 0.000 0.000 0.84 [20]
PSORIASIS_SF_DOWN 694 −0.82 −4.25 0.000 0.000
IL22 KC_UP 11 0.86 2.16 0.000 0.000 0.84 [21]
IL22 KC_DOWN 10 −0.82 −2.05 0.000 0.000
IFNG KC_UP 907 0.42 2.19 0.000 0.000 0.34 [21]
IFNG KC_DOWN 332 −0.25 −1.23 0.050 0.128
IL17&TNF KC UP 31 0.87 2.82 0.000 0.000 [22]
IL1 KC_UP 48 0.75 2.68 0.000 0.000 [23]
TERMINAL DIFFERENTIATION 33 0.58 1.86 0.000 0.001 [24]
PS_INFLAMM DCS_UP 131 0.33 1.41 0.008 0.041 [18]
a

Size, number of genes in gene set.

b

ES, enrichment score.

c

NES, normalized enrichment score.

d

CS, connectivity score.

e

REF, reference for gene set.