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. Author manuscript; available in PMC: 2013 Feb 1.
Published in final edited form as: Mol Cell Neurosci. 2011 Oct 19;49(2):85–96. doi: 10.1016/j.mcn.2011.10.004

Table 2.

TRANSFAC predictions within clustered ExactPlus (EP) hits at Sh3kbp1

Element ID
 Factor ID
 Factor Name
 Core
Score
 Matrix
Score
 Sequence
 Relative Position1
Sh3kbp1_EP02 GEN_INI NA - General Initiation Site 0.997 0.969 ctcCATTT 299 bp upstream of TSS2
HOXA4 homeobox A4 0.939 0.856 CCATTttg 299 bp upstream of TSS2
Nkx2-5 NK2 transcription factor related, locus 5 0.665 0.708 cCATTTtg 299 bp upstream of TSS2
Sh3kbp1_EP04 POU3F2 POU class 3 homeobox 2 0.566 0.743 TTAGAataat 17 bp upstream of TSS2
Sh3kbp1_EP10 SOX10 SRY box-containing 10 1.000 0.995 cTTTGTt 15 bp upstream of TSS3
1

TSS refers to the transcription start sites of Sh3kbp1