Table 1.
Participating studies | Subjects | Age (years)* | Female (%) | Assay | SNP | Number of subjects | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample | Method | Intra assay CV | Inter assay CV | A/A genotype | A/a genotype | a/a genotype | Total | ||||||
sICAM-1 | Bruneck17 | Population-based | 63±11 | 51.1 | Plasma | ELISA | 5.1% | 6.9% | rs579459 | 440 | 268 | 33 | 741 |
FHS12 | Community-based | 49±14 | 45.9 | Serum | ELISA | 3.9% | 3.9% | rs579459 | 4,176 | 2,340 | 329 | 6,845 | |
ARIC12 | Community-based | 56±5 | 38.4 | Plasma | ELISA | 4.0% | 5.1% | rs579459 | 495 | 287 | 43 | 825 | |
RS12 | Community-based | 70±9 | 53.3 | Plasma | ELISA | 6.9% | rs579459 | 351 | 214 | 35 | 600 | ||
CHS12 | Population-based | 73±6 | 42.8 | Plasma | ELISA | 5.0% | rs579459 | 855 | 556 | 69 | 1,480 | ||
WGHS11 | Population-based | 55±7 | 100 | Plasma | ELISA | 6.7% | rs507666† | 14,391 | 6,857 | 936 | 22,184 | ||
NHS14 | Type 2 diabetes | 56±7 | 100 | Plasma | ELISA | 3.3–4.8% | rs651007‡ | 612 | 337 | 47 | 996 | ||
sP-selectin | Bruneck17 | Population-based | 63±11 | 51.1 | Plasma | ELISA | 5.5% | 6.9% | rs579459 | 440 | 268 | 33 | 741 |
FHS12 | Community-based | 61±10 | 45.6 | Plasma | ELISA | 3.2% | rs579459 | 1,872 | 1,000 | 164 | 3,036 | ||
ARIC12 | Community-based | 57±5 | 35.7 | Plasma | ELISA | 3.9% | 5.8% | rs579459 | 432 | 265 | 41 | 738 | |
RS12 | Community-based | 69±9 | 48.8 | Plasma | ELISA | <5% | <10% | rs579459 | 253 | 135 | 18 | 406 | |
sE-selectin | Bruneck17 | Population-based | 63±11 | 51.1 | Plasma | ELISA | 4.8% | 7.4% | rs579459 | 440 | 268 | 33 | 741 |
DCCT/EDIC13 | Type 1 diabetes | 39±7 | 46 | Serum | SLPA | <2% | 5% | rs579459 | 452 | 209 | 24 | 685 | |
DCCT siblings13 | Non-diabetics | 45±9 | 57 | Serum | SLPA | <2% | 5% | rs579459 | 280 | 143 | 15 | 438 | |
NHS14 | Type 2 diabetes | 56±7 | 100 | Plasma | ELISA | 4.5–6.2% | rs651007‡ | 612 | 337 | 47 | 996 |
All participants were of European ancestry. FHS, Framingham Heart Study; ARIC, Atherosclerosis Risk in Communities; RS, Rotterdam Study; CHS, Cardiovascular Health Study; WGHS, Women’s Genome Health Study; NHS, Nurses’ Health Study; DCCT, Diabetes Control and Complications Trial; EDIC, Epidemiology of Diabetes Intervention and Complications.
Genotype distributions in the various cohorts were all consistent with Hardy-Weinberg equilibrium except for WGHS (sICAM-1, p=0.001) and FHS (sP-selectin, p=0.046). SNP, single nucleotide polymorphism; A/A genotype, major allele homozygotes; A/a genotype, heterozygotes; a/a genotype, minor allele homozygotes; CV, coefficient of variation; ELISA, Enzyme-linked immunosorbent assay; SLPA; SearchLight™ Proteome Array.
mean ± standard deviation.
in nearly complete linkage disequilibrium with SNP rs579459 (r2 = 0.96) based on data from the 1000 Genomes Project;
in complete linkage disequilibrium with SNP rs579459 (r2 = 1) based on data from the 1000 Genomes Project