Table 2. Genetic variability parameters of the strain populations under study.
Population | N | P | MNA | He | Ho | FIS |
K = 8 ( Fig. 2A ) * | ||||||
SP/PT MON-1 | 16 | 0.714 | 2.57 | 0.276 | 0.031 | 0.890 |
GR/TR MON-1 | 15 | 0.571 | 2.00 | 0.246 | 0.019 | 0.925 |
L. infantum non MON-1a | 12 | 1.000 | 5.43 | 0.710 | 0.196 | 0.732 |
TR/CY non MON-1 | 12 (13)b | 0.929 (1.000)b | 3.29 (2.86)b | 0.518 (0.533)b | 0.180 (0.217)b | 0.662 (0.604)b |
K = 5 ( Fig. 2B ) ** | ||||||
TR non MON-1 | 6 (7)b | 0.571 (0.786)b | 1.64 (2.21)b | 0.258 (0.325)b | 0.136 (0.211)b | 0.498 (0.370)b |
CY non MON-1 | 6 | 0.857 | 2.29 | 0.365 | 0.226 | 0.403 |
N, number of strains; P, proportion of polymorphic loci; MNA, mean number of alleles; He, expected heterozygosity; Ho, observed heterozygosity; FIS, inbreeding coefficient; CY, Cyprus; GR, Greece; PT, Portugal; SP, Spain; TR, Turkey.
*When all 76 strains are analyzed 8 populations are identified by STRUCTURE (Fig. 2A). Here the genetic variability parameters of four of these populations are shown;
The two L. infantum non MON-1 populations are analyzed together;
**At a subsequent STRUCTURE analysis the TR/CY non MON-1 group splits into two subpopulations (TR non MON-1 and CY non MON-1, Fig. 2B), which are analyzed here;
The respective values when the hybrid EP59 strain is included in the respective population are given in parenthesis.