Table 2. Comparison between the software used to identify pathogenicity islands in the uropathogenic E. coli strain CFT 073.
Software | Sensitivity (%) | Specificity(%) | Accuracy(%) |
IslandPath_DIMOB | 44.5 | 99.3 | 90.2 |
IslandPick | 7.5 | 99.7 | 84.5 |
SIGI_HMM | 21.9 | 96.9 | 84.5 |
IslandViewer | 55.8 | 96.2 | 89.5 |
PredictBias_GEI | 60.0 | 93.7 | 88.1 |
PredictBias_PAI | 39.2 | 96.2 | 86.8 |
PIPS_Auto | 94.8 | 93.7 | 93.9 |