Table 2. Characterization of genes that are differentially expressed between C57BL6 and BALB/c background Dab1 mutant mice and map to the Tau phosphorylation QTL on chromosome 1.
Gene Symbol | Accession number | Distance from D1Mit365 (Mb) | fold differences | Gene description |
Scly | BC019879 | 0.83 | −3.76 | Putative selenocysteine lyase |
Stk25 | BC071218 | 1.49 | 1.86 | Serine/threonine-protein kinase 25 |
Thap4 | BC013538 | 1.58 | 2.29 | THAP domain containing 4 |
Vps4b | BC003799 | 14.63 | 3.17 | vacuolar protein sorting 4B |
Clasp1 | BC057312 | 26.26 | 2.39 | cytoplasmic linker associated protein 1 |
Dbi | BC028874 | 27.98 | −1.68 | diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein) |
Dpp10 | BC067026 | 31.20 | 1.65 | dipeptidyl-peptidase 10 |
The QTL at D1Mit365 segregates with Tau hyperphosphorylation in dab1−/− mutant mice. We identified 7 differentially expressed genes that map between markers that define the outer limits of the QTL (D1Mit215-D1Mit90). One of these, Stk25, was considered a good candidate since it encoded a serine/threonine kinase. Gene expression differences for dab1−/− mutant animals are shown for C57BL/6 versus BALB/c backgrounds (negative value indicates higher expression in BALB/c).