Table 2. Comparison of predicted novel miRNAs in pigs with their homologs in Bos taurus.
miRNA-name | precusor-miRNA | Minimum free energy(kcal/mol) |
bta-mir-1343 | GGCTTCGGTGCTGGGGAGCGGCCCCCGGGCGGGCCTCTGCTCTGGCCCCTCCTGGGGCCCGCACTCTCGCTCCGGGCC | |
ssc-mir-1343 | GGCTTCGGTGCTGGGGAGCGGCCCCCGGGCGGGCCTCTGCTCTGGCCCCTCCTGGGGCCCGCACTCTCGCTCCGGGTC | −50.3 |
bta-mir-2320 | TGTCCCCATGGCACAGGGTCCAGCTGTCGGCCGTGATACCCGATGGGTCGATGATGGTCCCTGTGTTTTGGGGCG | |
ssc-mir-2320 | TGTCCCCATGGCACAGGGTCCAGCTGTCGGCTGTAATACCCGATGGGTCGATGATGGTCCCTGTGTTTGGGGCG | −37.7 |
bta-mir-2366 | CCCCGGGGTCCTCTTGTCTGAGCCCCAGAAAGAGGAGAGAGTGCTGGGTCACAGAAGAGGGTCTGGGGG | |
ssc-mir-2366 | CCCCAGGGTCCTCTTGTCTGAGCCCCAGAAAGAGGAGAGAGCGCTGGGTCACAGAAGAGGGTCTGGGGG | −31.6 |
bta-mir-2411 | GAGGAAATGTGGAGTGACTGTCAGATGCAGCCAGCAGAATAAGTGGTTTGGCTGAACTGTCTTACTCCCACATCCTC | |
ssc-mir-2411 | GAGGCAATGTGGAGTGACTGTCAGATGCAGCCATCAGAATAGGTGATTTGGCTGAACTGTCATACTCCCACATCCTC | −29.2 |
bta-mir-2483 | GAGTGAAAAGTTCCGTCAACCATCCAGCTGTTTGAGGTGATGCAAACAAACATCTGGTTGGTTGAGAGAATTTTTTACTT | |
ssc-mir-2483 | GAGTGAAAAGTTCCGTCAACCATCCAGCTGTTTGGGGTGATGCAAACAAACATCTGGTTGGTTGAGAGAATTTTTTACTT | −37.3 |
Note: The bold are the mature miRNA sequences.