Table 1. Data used in the study (I), sources, methods (M), and an overview of the comparisons (C).

Input variables (I)	Fishing pressure (catch) (F) [54]Exposure to thermal stress (E) [33]Biodiversity features (B)B1. Bioregions [18]B2. Coral reef geomorphology [35]B3. Mangroves [58], [59]B4. Fish species distributionsB5. Biodiversity value calculated with Zonation algorithmB6. Biological value calculated as species and habitat richness
Analysis methods (M)	M1a. Visual gradient overlay of inputs E, F and B5M1b. Visual gradient overlay of inputs E, F, and B6M2. Categorical classification of conservation and management actions from inputs E, F, and B5M3a. Marxan with 30% feature targets from inputs E, F, and B1–B4M3b. Marxan with 16% feature targets from inputs E, F, and B1–B4M4. Zonation with inputs B1–B4 as positively weighted features, and E, F as negatively weighted opposing features
Comparisons (C)	C1. Visual comparisons between M1a, M1b, M2 and M3aC2. Quantitative comparisons between M2 (strictest protection category only), M3a, M3b, M4 (threshold at rank with 16.3% average representation):- Total overlap- Average proportion of distributions included (B1–B4)- Fishing pressure in terms of total catch (F)- Exposure to thermal stress (E): Average value, Probability of result missing feature targets