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. 2012 Feb 16;7(2):e30910. doi: 10.1371/journal.pone.0030910

Table 3. Frequencies of favorable alleles of 15 SNP markers in the 1.5 Mb GGA1 region of 173.5–175 Mb.

SNP Position Allele FA WRR WRR1 XH BEH
GGaluGA054833 173504098 C/T C 0.83(80) 0.77(78) 0.27(79) 0.24(58)
rs15497877 173593810 C/T C 0.52(80) 0.80(79) 0.38(79) 0.24(58)
rs15497910 173613981 A/G A 0.38(80) 0.76(79) 0.44(79) 0.78(59)
GGaluGA054930 173841982 C/T C 0.95(80) 0.96(79) 0.59(77) 0.53(58)
rs13972304 173931557 A/C A 1.00(80) 1.00(79) 0.38(79) 0.44(59)
GGaluGA054970 173993933 T/G G 0.66(80) 0.55(79) 0.17(79) 0.14(59)
rs13553164 174027867 C/T T 0.64(80) 0.51(77) 0.07(77) 0.02(59)
rs14917305 174093115 C/T C 0.79(70) 0.64(77) 0.06(79) 0.18(59)
GGaluGA055001 174122198 A/G G 0.59(80) 0.27(79) 0.74(79) 0.51(57)
rs14917647 174379124 C/A A 0.66(80) 0.41(79) 0.05(79) 0.06(59)
rs13553485 174594379 C/A C 1.00(80) 0.94(79) 0.71(79) 0.44(58)
GGaluGA055291 174783129 C/T C 0.61(80) 0.51(79) 0.54(79) 0.76(59)
rs13973515 174847719 C/T T 0.57(80) 0.69(78) 0.25(79) 0.05(59)
GGaluGA055359 174921993 A/G A 0.87(80) 0.99(79) 0.35(79) 0.38(59)
GGaluGA055379 174961349 C/T C 0.66(80) 0.56(79) 0.26(79) 0.36(59)

FA = favorable allele for fast growing. Number in parentheses was the sample size. Bold face markers had unexpected frequencies for the favorable allele, lower in WRR and WRR1 and higher in XH and BEH.