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. 2012 Feb 16;7(2):e31252. doi: 10.1371/journal.pone.0031252

Table 2. Escherichia coli strains and plasmids used in this work.

Escherichia coliStrains Relevant genotype or characteristics Reference or source
MG1655 K-12, F λ rph-1 Standard laboratory strain [52]
AM70 MG1655 ΔcsgA::cat [37]
LG28 MG1655 ΔbcsA::kan [35]
LG30 MG1655 ΔadrA::kan obtained by P1 transduction from 3934adrA [38] This work
MG1655carB::Tn5kan Tn5::kan transposon inserted at nucleotide 2720 of the carB gene This work
MG1655ΔcarB::cat Replacement of the nucleotides 1–550 of the carB gene with a chloramphenicol resistance cassette This work
MG1655ΔcytR::cat Replacement of the cytR gene with a chloramphenicol resistance cassette This work
MG1655ΔpurH::cat Replacement of the purH gene with a chloramphenicol resistance cassette This work
MG1655ΔpyrB::cat Replacement of the pyrB gene with a chloramphenicol resistance cassette This work
MG1655ΔpyrC::tet Replacement of the pyrC gene with a tetracycline resistance cassette This work
MG1655ΔpyrE::tet Replacement of the pyrE gene with a tetracycline resistance cassette This work
MG1655ΔrutR::cat Replacement of the rutR gene with a chloramphenicol resistance cassette This work
MG1655ΔyedQ::kan Replacement of the yedQ gene with a kanamycin cassette This work
MG1655carB::Tn5kan ΔcsgA::cat Obtained by P1 transduction from AM70 into MG1655carB::Tn5kan This work
MG1655ΔcarB::cat ΔbcsA::kan Obtained by P1 transduction from LG28 into MG1655ΔcarB::cat This work
MG1655ΔcarB::cat ΔadrA::kan Obtained by P1 transduction from LG30 into MG1655ΔcarB::cat This work
MG1655ΔcarB::cat ΔyedQ::kan Obtained by inactivation of the yedQ gene by λ red technique This work
MG1655ΔpyrB::cat ΔbcsA::kan Obtained by P1 transduction from LG28 into MG1655ΔpyrB::cat This work
MG1655ΔpyrB::cat ΔadrA::kan Obtained by P1 transduction from LG30 into MG1655ΔpyrB::cat This work
MG1655ΔpyrB::cat ΔyedQ::kan Obtained by inactivation of the yedQ gene by λ red technique This work
Plasmids
pCR2.1 Control vector allowing direct cloning of PCR products, ampicillin resistance Invitrogen
pCR2.1-carB carB gene cloned as PCR product into pCR2.1 vector This work