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. 2012 Feb 16;7(2):e32288. doi: 10.1371/journal.pone.0032288

Table 1. PCR primers used to amplify cDNA sequences of both TcAce1 and TcAce2 genes and to analyze their gene expressions.

Primer name Sequence (5′-3′) Tm (°C) Product size (bp) Locationa
PCR for cDNA sequences
TcAce1-Fb CGGCCTGCTTACTAGTGATTCTAC 60.66 1714 17-1730
TcAce1-R ACATCGAGGGTGAGAAACTCC 60.50
TcAce1S-F CAACGACCGTTGTGCAAATA 60.56 320 N/A-219
TcAce1S-R CAGGGGATCATCTTCGGAGT 61.39
TcAce1E-F CGTTTGGACACCCACTTTCT 60.01 402 1665-N/A
TcAce1E-R GTCGTGTTGATTTTGAATACCTCAC 60.99
TcAce2-F AGACCTCATCACGCTGTTTG 55.2 1034 750-1783
TcAce2-R CTGGGTTATCCCGAAGCTTG 61.86
TcAce2S-F GTCGTAGAGGCGTCGTCGT 61.44 1014 N/A-895
TcAce2S-R TCTCCCCCGACATGTAACTC 59.93
TcAce2E-F AACCAGTGACAGACGACGTG 59.78 267 1627-N/A
TcAce2E-R CGCAACCGATGCGTTTAATA 61.86
Quantitative real-time PCR
TcAce1(Q)-F CCGTTCGTCCCAGTCATTG 55.3 121 1069-1189
TcAce1(Q)-R AGTAGTAGCCTTCTTCTGTGTTAG 55.4
TcAce2(Q)-F AGACCTCATCACGCTGTTTG 55.2 179 750-928
TcAce2(Q)-R CCTCCACCAGGACCTTCC 54.9
TcRps3-F CCGTCGTATTCGTGAATTGAC 54.8 130 279-408
TcRps3-R TCTAAGAGACTCTGCTTGTGC 54.7
a

Product location refers to the PCR fragment corresponding to the Ace gene nucleotide sequence of T. castaneum from NCBI database (TcAce1: XM_968369; TcAce2: XM_965681). N/A refers to the sequence based on the genomic sequence in Beetlebase (http://beetlebase.org/).

b

F and R refer to forward and reverse primers, respectively.