Table I.
Examples of Widely Used Docking Programs
| Program | Search strategy | Free for academia | Website |
|---|---|---|---|
| AutoDock (10) | GA/MC | Yes | http://autodock.scripps.edu |
| Dock (11) | IC | Yes | http://dock.compbio.ucsf.edu |
| FlexX (12) | IC | No | http://www.biosolveit.de/flexx |
| Glide (13) | Hybrid | No | http://www.schrodinger.com |
| Gold (14) | GA | No | http://www.ccdc.cam.ac.uk/products/life_sciences/gold |
| Surflex (15) | IC | No | http://www.tripos.com/index.php |
| ICM (16) | MC | No | http://www.molsoft.com/docking.html |
| LigandFit (17) | MC | No | http://accelrys.com/products/discovery-studio |
| eHiTS (18) | IC | No | http://www.simbiosys.ca/ehits/index.html |
GA genetic algorithm, MC Monte Carlo, IC incremental construction