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. 2012 Feb 14;68(Pt 3):300–309. doi: 10.1107/S0907444912001862

Table 1. Data-collection parameters and refinement statistics of SoIPMDH–IPM crystals at a series of pressures.

Values in parentheses are for the highest resolution shell.

Pressure (MPa) 0.1 160 340 410 580 650
Data collection
 Beamline or X-ray generator FR-E SuperBright PF-AR NW12A
 Detector R-AXIS VII ADSC Quantum 210r
 Temperature Room temperature
 Wavelength (Å) 1.5418 0.700
 Oscillation angle per frame (°) 1
 Exposure time per frame (s) 30 5 10 5 10–20 5
 Crystal-to-detector distance (mm) 95 300 200 250 250 250
 No. of crystals used 3 2 3 3 3 3
 Space group C2
 Unit-cell parameters
   a (Å) 104.797 (5) 104.298 (2) 103.824 (2) 103.610 (5) 103.144 (2) 103.135 (5)
   b (Å) 59.003 (2) 58.251 (2) 57.877 (1) 57.633 (3) 57.380 (2) 57.561 (5)
   c (Å) 76.754 (6) 76.044 (3) 75.671 (2) 75.504 (4) 75.213 (2) 75.067 (2)
  β (°) 119.070 (2) 119.090 (2) 119.023 (1) 118.978 (4) 118.758 (1) 118.668 (3)
 Resolution range (Å) 50.00–1.84 (1.87–1.84) 50.00–2.06 (2.10–2.06) 50.00–1.80 (1.83–1.80) 50.00–1.88 (1.92–1.88) 50.00–2.07 (2.11–2.07) 50.00–2.20 (2.24–2.20)
 No. of reflections 31951 (1612) 20579 (1019) 33575 (1697) 27609 (1469) 22194 (1152) 17498 (882)
Rmerge (%) 6.2 (39.9) 4.9 (15.7) 5.3 (31.5) 7.2 (39.8) 8.5 (37.7) 9.9 (35.4)
 Completeness (%) 89.6 (89.3) 83.2 (85.9) 91.6 (95.6) 86.4 (91.5) 94.0 (95.0) 88.9 (91.9)
 〈I/σ(I)〉 22.1 14.5 15.7 10.5 9.8 10.2
 Multiplicity 3.8 (3.8) 2.2 (1.9) 2.9 (2.8) 2.8 (2.7) 4.2 (4.2) 2.7 (2.7)
Refinement
Rwork (%) 14.20 13.54 15.70 15.60 17.35 16.56
Rfree§ (%) 18.49 19.21 20.20 21.29 23.46 24.42
 No. of atoms
  Protein 2807 2807 2807 2807 2807 2807
  Ligand/ion 14 14 14 14 14 14
  Water 184 204 275 273 199 176
B factor (Å2)
  Protein 25.62 18.75 18.20 17.62 16.55 16.86
  Ligand/ion 18.08 12.26 12.42 12.68 14.02 17.20
  Water 36.32 28.37 30.23 29.00 22.94 20.99
 R.m.s.d. from ideality
  Bond lengths (Å) 0.029 0.024 0.030 0.024 0.023 0.018
  Bond angles (°) 2.207 1.941 2.401 2.008 1.966 1.761

R merge is defined as Inline graphic Inline graphic, where Ii(hkl) is the ith observation of reflection hkl and 〈I(hkl)〉 is the weighted mean of all observations (after rejection of outliers).

R work is defined as Inline graphic Inline graphic.

§

R free is calculated using 5% of the data that were randomly chosen and excluded from the refinement.