Table 4. Network parameters of the signal transduction networks using the T-state as the initial structure (calculated using Cytoscape [38]).
Parameters | Initial network | Union network | Intersection network |
Number of nodes | 447 | 123 | 54 |
Number of edges | 2954 | 627 | 224 |
Network radius | 1 | 1 | 1 |
Network diameter | 15 | 10 | 7 |
Characteristic path length | 4.151 | 3.383 | 2.473 |
Shortest paths | 29979 (15%)* | 5115 (34%) | 984 (34%) |
Average number of neighbors | 13.217 | 10.195 | 8.296 |
Clustering coefficient | 0.251 | 0.264 | 0.268 |
*: Percentage of the shortest paths in all possible paths.