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. 2012 Feb 21;7(2):e31852. doi: 10.1371/journal.pone.0031852

Table 2. Structural Parameters Derived from SAXS for hPPARγ LBD (monomer) and hPPARγ/hRXRα LBD (heterodimer).

Parameters Monomerexp Monomerhigh-resolution model MonomerDAM Heterodimerexp Heterodimerhigh-resolution model HeterodimerDAM HeterodimerRigid body model <$>\raster="rg2"<$>
Dmax (Å) 65.0±5.0 64.2 62 85.0±5.0 85.4 85.7 89.1
Rg (Å) 21.0±0.1 20.2 20.1 28.2±0.1 25.5 27.9 26.4
(Gnom) (Gnom)
21.1 (Crysol) (Crysol) 29.1 (Crysol) (Crysol) (Crysol)
Guinier (Guinier)
Resolution (Å) ------------ ------------ 25.4 ------------ ------------ 25.6 ---------------
MWSAXS (kDa) § 31.1 ------------ ------------ 65.1 ------------ ------------ ------------
MWBSA (kDa) & 30.9 ------------ ------------ 57.9 ------------ ------------ ------------
MWSAXS MoW (kDa) # 33.0 ------------ ------------ 73.9 ------------ ------------ ------------
MWtheoretical (kDa) 31.3 ------------ ------------ 57.8 ------------ ------------ ------------

Calculated from the experimental data.

Values of hPPARγ LBD monomer and hPPARγ/hRXRα LBD heterodimer from the crystallographic model data (PDB id 1FM6).

Parameters of the Dummy Atom Models.

<$>\raster="rg1"<$>Parameters of Rigid Body Model. Resolution: 2π/qmax.

§

Experimental estimate of the Molecular Weight (MW) using the forward scattering I(0)/c at the absolute scale using water as a standard [21].

&

MW computed from the scattering data using BSA [22] as a secondary standard.

#

Estimate of the MW using SAXS MoW [23].